Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15992 | Canola | cytosol | 82.52 | 77.98 |
| CDX98072 | Canola | cytosol | 82.52 | 77.27 |
| CDY26557 | Canola | cytosol | 81.55 | 77.06 |
| CDY31260 | Canola | cytosol | 76.7 | 72.48 |
| CDY21045 | Canola | cytosol | 76.21 | 72.02 |
| AT1G12320.1 | Thale cress | cytosol | 72.82 | 70.75 |
| CDY34691 | Canola | cytosol | 64.56 | 59.38 |
| CDY59673 | Canola | cytosol | 63.59 | 58.48 |
| CDY25700 | Canola | cytosol | 58.25 | 53.81 |
| PGSC0003DMT400032504 | Potato | cytosol | 46.12 | 43.58 |
| Solyc08g007480.1.1 | Tomato | cytosol | 46.12 | 43.58 |
| PGSC0003DMT400010101 | Potato | cytosol | 45.15 | 42.47 |
| Solyc08g079480.2.1 | Tomato | cytosol | 44.66 | 42.01 |
| CDY41141 | Canola | cytosol | 42.72 | 40.18 |
| CDY52349 | Canola | cytosol | 42.23 | 40.09 |
| CDX71783 | Canola | cytosol | 42.23 | 39.91 |
| CDX74734 | Canola | cytosol | 42.72 | 39.82 |
| CDY37036 | Canola | cytosol | 42.23 | 39.01 |
| CDY57106 | Canola | cytosol | 41.26 | 38.12 |
| GSMUA_Achr8P19380_001 | Banana | cytosol | 34.95 | 33.18 |
| CDY51807 | Canola | cytosol | 19.42 | 32.79 |
| GSMUA_Achr5P18770_001 | Banana | cytosol | 33.98 | 32.26 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.01 | 31.19 |
| TraesCS5B01G325300.1 | Wheat | cytosol | 29.61 | 30.2 |
| TraesCS5A01G324500.1 | Wheat | cytosol | 28.64 | 29.8 |
| TraesCS5B01G325100.1 | Wheat | cytosol | 29.13 | 29.41 |
| TraesCS5D01G331200.1 | Wheat | cytosol | 29.13 | 29.41 |
| HORVU5Hr1G082620.1 | Barley | cytosol | 29.13 | 29.41 |
| Zm00001d018712_P001 | Maize | cytosol | 32.04 | 28.45 |
| TraesCS5A01G324300.1 | Wheat | cytosol | 28.16 | 28.43 |
| TraesCS5D01G331400.1 | Wheat | cytosol, plastid | 27.67 | 28.22 |
| EER97893 | Sorghum | cytosol | 32.52 | 27.13 |
| Os02t0455400-00 | Rice | endoplasmic reticulum, plasma membrane | 33.5 | 25.75 |
| GSMUA_Achr11P... | Banana | cytosol | 26.21 | 23.18 |
| CDY69766 | Canola | cytosol | 23.79 | 20.16 |
| CDY00273 | Canola | cytosol | 23.3 | 19.75 |
| CDY69982 | Canola | cytosol | 23.3 | 19.67 |
| CDY16780 | Canola | cytosol | 22.82 | 19.26 |
| CDX87243 | Canola | cytosol | 22.33 | 18.85 |
| CDX86908 | Canola | extracellular | 19.9 | 16.27 |
Protein Annotations
| EnsemblPlants:CDY30071 | EnsemblPlantsGene:GSBRNA2T00044623001 | InterPro:DUF1442 | PANTHER:PTHR33593 | PANTHER:PTHR33593:SF2 | PFAM:PF07279 |
| ProteinID:CDY30071 | ProteinID:CDY30071.1 | UniParc:UPI0004EF0AC4 | UniProt:A0A078GX40 | MapMan:35.2 | : |
Description
BnaC05g09490DBnaC05g09490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GX40]
Coordinates
chrLK032248:+:393930..394867
Molecular Weight (calculated)
22425.6 Da
IEP (calculated)
8.329
GRAVY (calculated)
-0.210
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVWSPETA SKAYLDTVKS CENLETPDAA ELIAAMAAGW NAKLIVETWS YGDAIASSIG LNVASQHENA RHICIVQNSR TESAYLQAIQ ELSSSPLNLP
101: ETIISEEPEN AMREIQGIDL LVVDWRHKEL AAAALRNATF GSRGAVVVCR NGYSRSSSGF SWRRALRSRE VVRTVTLPVT GGIEIAHVAA RNKNSGKSEK
201: GKRTCV
101: ETIISEEPEN AMREIQGIDL LVVDWRHKEL AAAALRNATF GSRGAVVVCR NGYSRSSSGF SWRRALRSRE VVRTVTLPVT GGIEIAHVAA RNKNSGKSEK
201: GKRTCV
001: MKLVWSPETA SKAYIDTVKS CENLETPDAA ELIAAMAAGW NVKLIVETWS EGDAIASSIG LNVASKHANA KHICIVQNSR SESAYLQAIQ ESSSPLNFPE
101: TIVAEEPGKA MKKLQGVDFL VVDWRNKEFA AAALKNAAFG NRGAVVVCRN GYSSLRRVLR DRKVVRTVTL PVTGGIEIAH VAARNSGKSG NNKRRWITHV
201: DQRSGEEHVF SI
101: TIVAEEPGKA MKKLQGVDFL VVDWRNKEFA AAALKNAAFG NRGAVVVCRN GYSSLRRVLR DRKVVRTVTL PVTGGIEIAH VAARNSGKSG NNKRRWITHV
201: DQRSGEEHVF SI
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:Q9LNB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.