Factsheet for Solyc08g079480.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010101	Potato	cytosol	97.26	97.26
Solyc08g007480.1.1	Tomato	cytosol	69.86	70.18
Solyc10g018200.1.1	Tomato	cytosol	55.71	54.46
CDY15992	Canola	cytosol	48.4	48.62
AT1G12320.1	Thale cress	cytosol	46.58	48.11
Bra019758.1-P	Field mustard	cytosol	47.95	47.73
CDX98072	Canola	cytosol	47.95	47.73
Bra026975.1-P	Field mustard	cytosol	47.49	47.71
CDY26557	Canola	cytosol	47.49	47.71
Bra016780.1-P	Field mustard	cytosol	47.03	47.25
CDY21045	Canola	cytosol	47.03	47.25
AT1G62840.1	Thale cress	cytosol	47.95	46.88
GSMUA_Achr8P19380_001	Banana	cytosol	46.12	46.54
CDY31260	Canola	cytosol	45.66	45.87
GSMUA_Achr5P18770_001	Banana	cytosol	44.29	44.7
CDY30071	Canola	cytosol	42.01	44.66
GSMUA_AchrUn_...	Banana	cytosol	44.29	44.5
CDY59673	Canola	cytosol	44.75	43.75
Bra034527.1-P	Field mustard	cytosol	44.75	43.75
CDY34691	Canola	cytosol	44.75	43.75
CDY25700	Canola	cytosol	44.29	43.5
TraesCS5D01G331200.1	Wheat	cytosol	36.07	38.73
TraesCS5A01G324500.1	Wheat	cytosol	34.7	38.38
TraesCS5B01G325100.1	Wheat	cytosol	35.62	38.24
TraesCS5D01G331400.1	Wheat	cytosol, plastid	35.16	38.12
HORVU5Hr1G082620.1	Barley	cytosol	35.16	37.75
TraesCS5A01G324300.1	Wheat	cytosol	34.7	37.25
TraesCS5B01G325300.1	Wheat	cytosol	33.79	36.63
Os02t0455400-00	Rice	endoplasmic reticulum, plasma membrane	43.38	35.45
Zm00001d018712_P001	Maize	cytosol	35.16	33.19
EER97893	Sorghum	cytosol	36.07	31.98
Solyc06g034410.2.1	Tomato	cytosol	28.31	28.7
Solyc03g083490.2.1	Tomato	plastid	26.94	27.57
Solyc03g083500.2.1	Tomato	cytosol	26.94	27.31
Solyc01g091250.2.1	Tomato	cytosol	25.57	25.93
GSMUA_Achr11P...	Banana	cytosol	26.03	24.46
Solyc01g095920.2.1	Tomato	cytosol	24.2	23.35

Protein Annotations

EnsemblPlants:Solyc08g079480.2.1	EnsemblPlantsGene:Solyc08g079480.2	Gene3D:3.40.50.150	InterPro:DUF1442	PANTHER:PTHR33593	PANTHER:PTHR33593:SF2
PFAM:PF07279	SEG:seg	UniParc:UPI000276B2EC	UniProt:K4CNU8	MapMan:35.2	:

Description

No Description!

Coordinates

chr8:+:62998440..62999467

Molecular Weight (calculated)

23820.6 Da

IEP (calculated)

7.507

GRAVY (calculated)

-0.109

Length

219 amino acids

Sequence
(BLAST)

001: MKLVWSPEKA SKAYIDTVKS CEIFRESSVA EMISAMAAGW DAQMIVETWS RGGVMATSIG LAVANYHTGG RHICVVPDED SRTEYVEAME NAGMSPEVVI
101: GEPEEAMDGL IGIDFLVVDC RRNDFGRILG VAKLGHRGAV LICKNASSRI ASDFRWRSVL DGKSRIVRSV FLPVGKGLDI AHIGATVTGG GKKGGSGKTE
201: SRWIRHFDRD SGEEFVIRK

Best Arabidopsis Sequence Match ( AT2G45360.1 )
(BLAST)

001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR

Arabidopsis Description

Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.