Factsheet for Bra029269.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69982	Canola	cytosol	93.06	93.44
AT5G62280.1	Thale cress	cytosol	83.27	86.44
Bra010072.1-P	Field mustard	cytosol	85.31	86.01
Bra035898.1-P	Field mustard	cytosol	84.9	85.25
VIT_16s0022g01630.t01	Wine grape	cytosol, plastid	51.43	57.53
KRG92460	Soybean	cytosol, plastid	48.57	53.36
KRH38734	Soybean	cytosol, plastid	47.76	52.7
KRH34338	Soybean	cytosol, plastid	48.16	52.68
PGSC0003DMT400059241	Potato	cytosol, plastid	44.9	50.93
KRH09236	Soybean	cytosol	37.55	50.83
Solyc03g083500.2.1	Tomato	cytosol	44.49	50.46
GSMUA_Achr5P18780_001	Banana	cytosol	38.78	44.6
Bra040314.1-P	Field mustard	cytosol	26.53	29.15
Bra004904.1-P	Field mustard	cytosol	26.12	28.96
Bra007560.1-P	Field mustard	cytosol	24.9	28.11
Bra007557.1-P	Field mustard	plastid	24.49	27.4
Bra026975.1-P	Field mustard	cytosol	23.67	26.61
Bra019758.1-P	Field mustard	cytosol	23.27	25.91
Bra016780.1-P	Field mustard	cytosol	22.86	25.69
Bra034527.1-P	Field mustard	cytosol	21.63	23.66

Protein Annotations

EnsemblPlants:Bra029269.1	EnsemblPlants:Bra029269.1-P	EnsemblPlantsGene:Bra029269	Gene3D:3.40.50.150	InterPro:DUF1442	PANTHER:PTHR33593
PANTHER:PTHR33593:SF3	PFAM:PF07279	SEG:seg	UniParc:UPI0002545BBF	UniProt:M4EKF2	MapMan:35.2

Description

AT5G62280 (E=3e-106) | unknown protein

Coordinates

chrA02:+:26218003..26218937

Molecular Weight (calculated)

27093.2 Da

IEP (calculated)

7.326

GRAVY (calculated)

-0.327

Length

245 amino acids

Sequence
(BLAST)

001: MAFWSAENAT KAYLTTLKTD QRTKEPNVAE FISALAAGNN ARKITVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISKKMLEP SEIHHIQFVV
101: GEPNDNALIN DHFGEADFVL VDCKIKNHQD IVRKIVSQHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVLND DGSYNQKMMK
201: KNDDDYHQHH DHVRKSNWVV KVDKCTGEEH VFRVRVPRGE ATIEA

Best Arabidopsis Sequence Match ( AT5G62280.1 )
(BLAST)

001: MAFWSAENAT KAYLSTLKTD QRTKEPNVAE FISALAAGNS ARKIAVACAG AANADILVAL IAAANQTRGQ VVCVLRGIEE LIISQKMLEP SEIHQIQFVV
101: GESNDDTLIN NHFGEADFVL VDCNLENHQE IVGKILNHHE ENARTGGGSG VAVVVGYNAF SRGSWRFSDG RKTQFLPIGE GLLVTRVNDN QKMMMKNHHR
201: DQVMRKSRWV VKVDKCTGEE HVFRVRVPRG EAIIEA

Arabidopsis Description

At5g62280 [Source:UniProtKB/TrEMBL;Acc:Q9LVA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.