Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g095920.2.1 | Tomato | cytosol | 80.16 | 88.99 |
| VIT_15s0046g00720.t01 | Wine grape | cytosol | 51.98 | 55.04 |
| KRG97184 | Soybean | cytosol | 28.97 | 52.9 |
| KRH47906 | Soybean | nucleus | 44.84 | 47.48 |
| KRH06462 | Soybean | vacuole | 36.9 | 47.45 |
| GSMUA_Achr6P13950_001 | Banana | mitochondrion | 46.03 | 46.96 |
| PGSC0003DMT400059243 | Potato | cytosol | 29.37 | 34.58 |
| PGSC0003DMT400066768 | Potato | extracellular | 23.81 | 32.61 |
| PGSC0003DMT400072045 | Potato | extracellular | 27.38 | 32.39 |
| PGSC0003DMT400059241 | Potato | cytosol, plastid | 25.79 | 30.09 |
| PGSC0003DMT400032504 | Potato | cytosol | 25.4 | 29.36 |
| PGSC0003DMT400010101 | Potato | cytosol | 25.0 | 28.77 |
| PGSC0003DMT400024806 | Potato | cytosol | 16.67 | 22.22 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400000636 | EnsemblPlantsGene:PGSC0003DMG400000225 | EntrezGene:102586866 | Gene3D:3.40.50.150 | InterPro:DUF1442 | InterPro:SAM-dependent_MTases |
| PANTHER:PTHR43167 | PFAM:PF07279 | PGSC:PGSC0003DMG400000225 | RefSeq:XP_006339803.1 | SUPFAM:SSF53335 | UniParc:UPI000295FBEB |
| UniProt:M0ZH24 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400000225]
Coordinates
chr1:-:73466484..73468413
Molecular Weight (calculated)
27679.4 Da
IEP (calculated)
9.350
GRAVY (calculated)
-0.491
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWSPKYAAN AYLDTLKLCG KHKQMCNSCT GTQEPECNEF LSALAAGMSA KLIVEVTTEG SPSTVALAAA ARQTGGKLVC IIPEPILDKT QKVIQETGLN
101: DMVEFKTGDP VEILHNYENI DFSLVDRKTN DYEILMEKLD VNPRRSVVVT NNVQGRKGIG GGHLKKVENK VKVRSLQHPI GKGLEVTMIG KSTEFGKKEN
201: RSKSGCYSHL IRGGEKKNGH VVKKGDKSKW VFVVDEKSGE EHIYRMPKSS GS
101: DMVEFKTGDP VEILHNYENI DFSLVDRKTN DYEILMEKLD VNPRRSVVVT NNVQGRKGIG GGHLKKVENK VKVRSLQHPI GKGLEVTMIG KSTEFGKKEN
201: RSKSGCYSHL IRGGEKKNGH VVKKGDKSKW VFVVDEKSGE EHIYRMPKSS GS
001: MKLVWSPETA SDAYIDTVKS CKSDKESGVA EFLSATAAGW NARLIVETWS RGDPITTSVG LAVAATHTGG RHVCIVPDEQ SKLEYVLAMR GFVTTEVVVV
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
101: GESVENTMEE FPGVDFLVVD SKRREFVRTL RFAKLSNKGA VLVCKNAMHR AISGFKWHDV LKRGTRVVRS VFLPVGSGLD IVHVGATGRG DSRNLRSRWI
201: RHVDHLSGEE HLFRR
Arabidopsis Description
Ankyrin repeat/KH domain protein (DUF1442) [Source:UniProtKB/TrEMBL;Acc:O22136]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.