Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G462300.1 | Wheat | cytosol | 96.73 | 93.8 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 96.88 | 93.41 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 96.73 | 93.4 |
| OQU78515 | Sorghum | cytosol | 79.94 | 76.86 |
| Os05t0587300-01 | Rice | cytosol | 62.26 | 75.5 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 73.11 | 71.51 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 60.92 | 59.85 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 57.36 | 59.48 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 41.46 | 55.47 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 21.4 | 54.55 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 55.72 | 54.11 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 57.06 | 53.93 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 52.6 | 53.15 |
| KRH55099 | Soybean | nucleus | 52.6 | 52.21 |
| KRH22291 | Soybean | plastid | 45.17 | 52.05 |
| KRH26223 | Soybean | nucleus | 51.86 | 51.63 |
| Bra038116.1-P | Field mustard | cytosol | 50.37 | 51.52 |
| CDY25865 | Canola | cytosol | 50.37 | 51.52 |
| KRH21985 | Soybean | cytosol | 52.9 | 51.45 |
| CDY25722 | Canola | cytosol, plastid | 50.97 | 51.42 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 54.23 | 51.41 |
| CDY45930 | Canola | cytosol | 50.22 | 51.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.36 | 51.12 |
| KRH27330 | Soybean | cytosol | 52.9 | 51.0 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 50.67 | 50.9 |
| CDY02514 | Canola | cytosol, plastid | 50.67 | 50.9 |
| PGSC0003DMT400054803 | Potato | cytosol | 22.14 | 50.68 |
| Solyc07g062580.2.1 | Tomato | cytosol | 52.3 | 50.21 |
| PGSC0003DMT400032362 | Potato | cytosol | 52.15 | 50.14 |
| AT1G53300.1 | Thale cress | cytosol | 50.07 | 48.21 |
| CDY34224 | Canola | cytosol | 4.9 | 47.83 |
| AT3G58620.1 | Thale cress | cytosol | 47.99 | 47.36 |
| Zm00001d009724_P009 | Maize | cytosol | 75.19 | 47.33 |
| Bra000267.1-P | Field mustard | cytosol | 47.25 | 47.32 |
| CDY61202 | Canola | cytosol | 47.1 | 47.24 |
| CDY42827 | Canola | cytosol | 46.36 | 46.5 |
| CDY51514 | Canola | cytosol | 46.21 | 46.49 |
| Bra007405.1-P | Field mustard | cytosol | 46.36 | 46.36 |
| AT2G42580.1 | Thale cress | cytosol | 47.4 | 46.16 |
| CDY55390 | Canola | cytosol | 45.77 | 46.04 |
| CDY49237 | Canola | cytosol | 45.62 | 46.03 |
| CDX71941 | Canola | cytosol | 46.06 | 45.99 |
| Bra004709.1-P | Field mustard | cytosol | 44.13 | 45.21 |
| PGSC0003DMT400054902 | Potato | cytosol | 19.76 | 44.48 |
| KRH27037 | Soybean | nucleus | 44.58 | 44.44 |
| Bra023795.1-P | Field mustard | cytosol | 5.65 | 43.18 |
| Solyc10g007240.1.1 | Tomato | cytosol | 37.15 | 42.09 |
| PGSC0003DMT400054904 | Potato | cytosol | 37.74 | 42.05 |
| HORVU4Hr1G024490.1 | Barley | cytosol | 19.76 | 41.56 |
| Solyc10g007230.1.1 | Tomato | cytosol | 36.11 | 40.77 |
| PGSC0003DMT400054911 | Potato | cytosol | 31.5 | 40.69 |
| Solyc10g007220.1.1 | Tomato | cytosol | 30.31 | 40.4 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 36.85 | 40.33 |
| AT3G14950.1 | Thale cress | cytosol | 43.54 | 40.14 |
| Solyc10g007420.2.1 | Tomato | cytosol | 24.37 | 38.59 |
| Bra027292.1-P | Field mustard | cytosol | 41.16 | 37.74 |
| CDX98517 | Canola | cytosol | 40.56 | 37.71 |
| CDX97619 | Canola | cytosol | 40.56 | 37.66 |
| PGSC0003DMT400054909 | Potato | cytosol | 22.88 | 37.38 |
| Solyc10g007250.1.1 | Tomato | cytosol | 15.45 | 37.28 |
| CDY32327 | Canola | cytosol | 40.27 | 37.17 |
| CDY20095 | Canola | nucleus | 40.12 | 37.09 |
| CDY34222 | Canola | cytosol | 16.49 | 36.04 |
| Bra021583.1-P | Field mustard | nucleus | 40.27 | 35.85 |
| CDY40820 | Canola | mitochondrion | 14.86 | 35.59 |
| PGSC0003DMT400091014 | Potato | nucleus | 31.95 | 35.42 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 19.76 | 35.19 |
| CDY34223 | Canola | cytosol | 16.34 | 33.74 |
| Bra023793.1-P | Field mustard | cytosol | 20.51 | 33.5 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 15.9 | 32.82 |
| HORVU6Hr1G074660.5 | Barley | plastid | 27.64 | 29.81 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | UniProt:A0A287GSH9 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0045454 | EnsemblPlantsGene:HORVU1Hr1G093390 | EnsemblPlants:HORVU1Hr1G093390.2 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 |
| InterPro:IPR019734 | PFAM:PF00085 | PFAM:PF00515 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR22904 | PANTHER:PTHR22904:SF395 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000B486537 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:552906531..552910738
Molecular Weight (calculated)
71101.5 Da
IEP (calculated)
8.947
GRAVY (calculated)
-0.267
Length
673 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSEADRVR RLTLEGRGGV DRDKPDSKRD VFADLGSPVS PLRLRATPSS SSSSAGSAKS PALCNAAATG GRGGGARSVS HSGELAAESG SNPPRPPGHR
101: RSGSGPLIFS GGSGSSGGGG GGGGGSTASS PLINALPTGN ICSSGRVAPA PAAPRPRARP DVLGSGTGHY GHGSIMRGGM APAWSNGVDA APPDSLQEVT
201: RAGNELYKQG RYGDALRHYD RALALCPDSA ACRGNRAAAL TGLGRLTEAL RDCEEAVRLD PASGRAHGRL AALCLRFGMV EKARRQLTLA GNANQSDPAE
301: WQKLHEVESH LGKCMDARRI GDWKSALREA DAAIANGADS SQLLLAMRSE ALLRLNKLEE ADSTITGLLK LDSASLSSMS TKLSGMVADS YVHVVQAQVN
401: MAFGRFDAAI AIAEKARAVD PANAEVGLIL NNMRLVARAR AQGNDLFKAG KFAEASIAYG EGLKHEPLNP VLYCNRAACW SKLGRSAKAV EDCNEALRIQ
501: PSYTKALLRR AASYAKLERW ADCVRDYEVL RKELPGDTEV AESLFHAQVA LKTTRGEEVS NMKFGGEVEI VTSIEQVRAA IHSPGVTILY FMATMNQQCA
601: QITPSVDALC SECPSVNFLK VNVDESLMIA KAENVRVVPA FKIYKDGARV KEMICPSLHV LRYSVRHYAV SNS
101: RSGSGPLIFS GGSGSSGGGG GGGGGSTASS PLINALPTGN ICSSGRVAPA PAAPRPRARP DVLGSGTGHY GHGSIMRGGM APAWSNGVDA APPDSLQEVT
201: RAGNELYKQG RYGDALRHYD RALALCPDSA ACRGNRAAAL TGLGRLTEAL RDCEEAVRLD PASGRAHGRL AALCLRFGMV EKARRQLTLA GNANQSDPAE
301: WQKLHEVESH LGKCMDARRI GDWKSALREA DAAIANGADS SQLLLAMRSE ALLRLNKLEE ADSTITGLLK LDSASLSSMS TKLSGMVADS YVHVVQAQVN
401: MAFGRFDAAI AIAEKARAVD PANAEVGLIL NNMRLVARAR AQGNDLFKAG KFAEASIAYG EGLKHEPLNP VLYCNRAACW SKLGRSAKAV EDCNEALRIQ
501: PSYTKALLRR AASYAKLERW ADCVRDYEVL RKELPGDTEV AESLFHAQVA LKTTRGEEVS NMKFGGEVEI VTSIEQVRAA IHSPGVTILY FMATMNQQCA
601: QITPSVDALC SECPSVNFLK VNVDESLMIA KAENVRVVPA FKIYKDGARV KEMICPSLHV LRYSVRHYAV SNS
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.