Factsheet for HORVU7Hr1G066100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G76920.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT1G76920.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT1G76920.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G083600.1	Barley	extracellular	31.25	87.3
HORVU7Hr1G083560.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.8	86.3
HORVU7Hr1G083580.2	Barley	cytosol	35.8	68.48
Zm00001d035880_P001	Maize	plastid	58.52	53.65
HORVU2Hr1G124610.1	Barley	cytosol	44.32	37.86
HORVU5Hr1G045010.1	Barley	extracellular, plastid, vacuole	61.93	32.44
Zm00001d002882_P001	Maize	cytosol, nucleus, plastid	66.48	28.61
EES13145	Sorghum	cytosol, nucleus, plastid	67.05	28.57
Os04t0686700-01	Rice	plastid	68.75	28.47
Zm00001d026678_P001	Maize	plastid	65.91	28.36
GSMUA_Achr8P07870_001	Banana	cytosol, peroxisome, plastid	44.89	19.17
CDY48548	Canola	cytosol, nucleus, peroxisome, plastid	38.64	18.48
CDX68078	Canola	cytosol, nucleus, peroxisome, plastid	38.64	18.48
Bra003700.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	38.64	18.48
PGSC0003DMT400002094	Potato	cytosol	39.2	18.3
Solyc04g071130.1.1	Tomato	extracellular	39.2	18.3
AT1G76920.1	Thale cress	cytosol	38.07	17.91
VIT_18s0076g00350.t01	Wine grape	cytosol	37.5	17.65
KRH70323	Soybean	cytosol	36.36	17.44
HORVU2Hr1G124540.2	Barley	cytosol	31.25	15.41
Zm00001d003753_P001	Maize	cytosol	5.11	10.11
Zm00001d047158_P001	Maize	cytosol	5.11	10.11
Zm00001d009851_P001	Maize	nucleus, peroxisome, plasma membrane	27.27	9.43
Zm00001d024013_P001	Maize	cytosol	9.09	6.13

Protein Annotations

EnsemblPlants:HORVU7Hr1G066100.1	EnsemblPlantsGene:HORVU7Hr1G066100	ncoils:Coil	SEG:seg	UniParc:UPI000B488720	UniProt:A0A287WQU9
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:332455480..332456239

Molecular Weight (calculated)

16810.4 Da

IEP (calculated)

8.484

GRAVY (calculated)

-0.043

Length

176 amino acids

Sequence
(BLAST)

001: MGIPLQNLPV AFFYTRCNAR ASGDVFEILK RPRLLPGTGG RRVLMIGGLR SSFALDVPCS TVLILRLDLA TMEWDEVGRM PPNMYRCFTG LYEAAAQGST
101: MLPAPVADGN NKVKVFGGDG KVWFGGKHVR GKLAMWEEDD VGSSGGKWDW VDGVXXXXXX XXXXXXXXXX XXXXXX

Best Arabidopsis Sequence Match ( AT1G76920.1 )
(BLAST)

001: MESSPVNCLP PDSLHQIFSS LPIRDIMICR SVCKFFNQLL TSQCFIEIIS TRPPLNLLAL RPPHHHHSHR HSGNGHATNI RPYIHVYDPE QNQWFRFNLD
101: FLPFRSPQPV ASSSGLIYLW GDSIDLAESS KSLVACNPLT RQFKVLPQLG SAWSRHGTVL VDSVNRVMVL TELAALYYSG TVVANQWLKF SSNLPSKPRS
201: PVLMSSSVFA LCDVGSPWRS QWKLFSCKLT NLTITHTNWV CLEKHEWGDI FDIIKRPRLL RGNGDSKLLM IGGLKSTFSL NPACSTILIL RLDLESLEWE
301: EAGRMPLEMY RGFQESSKFK VFGGGDRVYF SAKRMGKLAM WDCWQGWRWI EGVPGYADGL CRGFVFDAKL TLMP

Arabidopsis Description

SKIP15SKP1-interacting partner 15 [Source:UniProtKB/Swiss-Prot;Acc:O49279]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.