Factsheet for HORVU7Hr1G083600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G76920.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT1G76920.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT1G76920.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G083560.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	80.95	69.86
HORVU7Hr1G066100.1	Barley	cytosol, mitochondrion, plastid	87.3	31.25
Zm00001d035880_P001	Maize	plastid	79.37	26.04
HORVU5Hr1G045010.1	Barley	extracellular, plastid, vacuole	85.71	16.07
HORVU7Hr1G083580.2	Barley	cytosol	22.22	15.22
HORVU2Hr1G124610.1	Barley	cytosol	49.21	15.05
Os04t0686700-01	Rice	plastid	95.24	14.12
Zm00001d026678_P001	Maize	plastid	90.48	13.94
Zm00001d002882_P001	Maize	cytosol, nucleus, plastid	90.48	13.94
EES13145	Sorghum	cytosol, nucleus, plastid	90.48	13.8
GSMUA_Achr8P07870_001	Banana	cytosol, peroxisome, plastid	71.43	10.92
KRH70323	Soybean	cytosol	55.56	9.54
VIT_18s0076g00350.t01	Wine grape	cytosol	55.56	9.36
AT1G76920.1	Thale cress	cytosol	52.38	8.82
Solyc04g071130.1.1	Tomato	extracellular	50.79	8.49
Bra003700.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	49.21	8.42
CDY48548	Canola	cytosol, nucleus, peroxisome, plastid	49.21	8.42
CDX68078	Canola	cytosol, nucleus, peroxisome, plastid	49.21	8.42
HORVU2Hr1G124540.2	Barley	cytosol	47.62	8.4
PGSC0003DMT400002094	Potato	cytosol	49.21	8.22
Zm00001d009851_P001	Maize	nucleus, peroxisome, plasma membrane	31.75	3.93
Zm00001d024013_P001	Maize	cytosol	6.35	1.53
Zm00001d003753_P001	Maize	cytosol	0.0	0.0
Zm00001d047158_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU7Hr1G083600.1

EnsemblPlantsGene:HORVU7Hr1G083600

UniParc:UPI000B479D38

UniProt:A0A287X4R4

MapMan:35.2

Description

No Description!

Coordinates

chrchr7H:-:503934678..503934866

Molecular Weight (calculated)

6751.3 Da

IEP (calculated)

4.743

GRAVY (calculated)

0.273

Length

63 amino acids

Sequence
(BLAST)

1: GGRVLMIGGL RSSFALDAPC STVLILRLDL ATMEWDEASR MPPNMYRCFT GLCEAAAQGS AMP

Best Arabidopsis Sequence Match ( AT1G76920.1 )
(BLAST)

001: MESSPVNCLP PDSLHQIFSS LPIRDIMICR SVCKFFNQLL TSQCFIEIIS TRPPLNLLAL RPPHHHHSHR HSGNGHATNI RPYIHVYDPE QNQWFRFNLD
101: FLPFRSPQPV ASSSGLIYLW GDSIDLAESS KSLVACNPLT RQFKVLPQLG SAWSRHGTVL VDSVNRVMVL TELAALYYSG TVVANQWLKF SSNLPSKPRS
201: PVLMSSSVFA LCDVGSPWRS QWKLFSCKLT NLTITHTNWV CLEKHEWGDI FDIIKRPRLL RGNGDSKLLM IGGLKSTFSL NPACSTILIL RLDLESLEWE
301: EAGRMPLEMY RGFQESSKFK VFGGGDRVYF SAKRMGKLAM WDCWQGWRWI EGVPGYADGL CRGFVFDAKL TLMP

Arabidopsis Description

SKIP15SKP1-interacting partner 15 [Source:UniProtKB/Swiss-Prot;Acc:O49279]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.