Factsheet for HORVU7Hr1G083560.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
TargetP:	secretory

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G76920.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT1G76920.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT1G76920.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G083600.1	Barley	extracellular	69.86	80.95
HORVU7Hr1G066100.1	Barley	cytosol, mitochondrion, plastid	86.3	35.8
HORVU7Hr1G083580.2	Barley	cytosol	36.99	29.35
Zm00001d035880_P001	Maize	plastid	73.97	28.12
HORVU2Hr1G124610.1	Barley	cytosol	67.12	23.79
HORVU5Hr1G045010.1	Barley	extracellular, plastid, vacuole	84.93	18.45
Zm00001d002882_P001	Maize	cytosol, nucleus, plastid	84.93	15.16
Os04t0686700-01	Rice	plastid	87.67	15.06
Zm00001d026678_P001	Maize	plastid	83.56	14.91
EES13145	Sorghum	cytosol, nucleus, plastid	83.56	14.77
GSMUA_Achr8P07870_001	Banana	cytosol, peroxisome, plastid	67.12	11.89
KRH70323	Soybean	cytosol	46.58	9.26
VIT_18s0076g00350.t01	Wine grape	cytosol	46.58	9.09
AT1G76920.1	Thale cress	cytosol	42.47	8.29
Bra003700.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	41.1	8.15
CDY48548	Canola	cytosol, nucleus, peroxisome, plastid	41.1	8.15
CDX68078	Canola	cytosol, nucleus, peroxisome, plastid	41.1	8.15
Solyc04g071130.1.1	Tomato	extracellular	41.1	7.96
PGSC0003DMT400002094	Potato	cytosol	41.1	7.96
HORVU2Hr1G124540.2	Barley	cytosol	30.14	6.16
Zm00001d003753_P001	Maize	cytosol	4.11	3.37
Zm00001d047158_P001	Maize	cytosol	4.11	3.37
Zm00001d009851_P001	Maize	nucleus, peroxisome, plasma membrane	20.55	2.95
Zm00001d024013_P001	Maize	cytosol	6.85	1.92

Protein Annotations

EnsemblPlants:HORVU7Hr1G083560.1

EnsemblPlantsGene:HORVU7Hr1G083560

UniParc:UPI000B4722E0

UniProt:A0A287X4J1

MapMan:35.2

Description

No Description!

Coordinates

chrchr7H:-:503825395..503831649

Molecular Weight (calculated)

7404.0 Da

IEP (calculated)

6.367

GRAVY (calculated)

0.114

Length

73 amino acids

Sequence
(BLAST)

1: XXXGLRSSFA LDAPCSTVLI LRLDLATMEW DEASRMPPNM YRCFTGLCEA AAQGSAMPPA PVAGGNNKVK VFG

Best Arabidopsis Sequence Match ( AT1G76920.1 )
(BLAST)

001: MESSPVNCLP PDSLHQIFSS LPIRDIMICR SVCKFFNQLL TSQCFIEIIS TRPPLNLLAL RPPHHHHSHR HSGNGHATNI RPYIHVYDPE QNQWFRFNLD
101: FLPFRSPQPV ASSSGLIYLW GDSIDLAESS KSLVACNPLT RQFKVLPQLG SAWSRHGTVL VDSVNRVMVL TELAALYYSG TVVANQWLKF SSNLPSKPRS
201: PVLMSSSVFA LCDVGSPWRS QWKLFSCKLT NLTITHTNWV CLEKHEWGDI FDIIKRPRLL RGNGDSKLLM IGGLKSTFSL NPACSTILIL RLDLESLEWE
301: EAGRMPLEMY RGFQESSKFK VFGGGDRVYF SAKRMGKLAM WDCWQGWRWI EGVPGYADGL CRGFVFDAKL TLMP

Arabidopsis Description

SKIP15SKP1-interacting partner 15 [Source:UniProtKB/Swiss-Prot;Acc:O49279]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.