Factsheet for HORVU2Hr1G124610.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G76920.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT1G76920.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT1G76920.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G083580.2	Barley	cytosol	40.29	90.22
HORVU7Hr1G083560.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.79	67.12
HORVU7Hr1G083600.1	Barley	extracellular	15.05	49.21
HORVU7Hr1G066100.1	Barley	cytosol, mitochondrion, plastid	37.86	44.32
Zm00001d035880_P001	Maize	plastid	30.58	32.81
HORVU5Hr1G045010.1	Barley	extracellular, plastid, vacuole	45.63	27.98
Os04t0686700-01	Rice	plastid	46.6	22.59
Zm00001d002882_P001	Maize	cytosol, nucleus, plastid	44.66	22.49
EES13145	Sorghum	cytosol, nucleus, plastid	44.66	22.28
Zm00001d026678_P001	Maize	plastid	44.17	22.25
Zm00001d047158_P001	Maize	cytosol	7.28	16.85
Zm00001d003753_P001	Maize	cytosol	7.28	16.85
Bra003700.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	22.33	12.5
CDY48548	Canola	cytosol, nucleus, peroxisome, plastid	22.33	12.5
CDX68078	Canola	cytosol, nucleus, peroxisome, plastid	22.33	12.5
Solyc04g071130.1.1	Tomato	extracellular	22.82	12.47
AT1G76920.1	Thale cress	cytosol	22.33	12.3
PGSC0003DMT400002094	Potato	cytosol	22.33	12.2
VIT_18s0076g00350.t01	Wine grape	cytosol	21.84	12.03
KRH70323	Soybean	cytosol	20.87	11.72
GSMUA_Achr8P07870_001	Banana	cytosol, peroxisome, plastid	20.87	10.44
Zm00001d009851_P001	Maize	nucleus, peroxisome, plasma membrane	8.74	3.54
Zm00001d024013_P001	Maize	cytosol	4.37	3.45
HORVU2Hr1G124540.2	Barley	cytosol	1.94	1.12

Protein Annotations

EnsemblPlants:HORVU2Hr1G124610.1

EnsemblPlantsGene:HORVU2Hr1G124610

SEG:seg

UniParc:UPI000B461206

UniProt:A0A287JSM1

MapMan:35.2

Description

No Description!

Coordinates

chrchr2H:+:758798962..758799582

Molecular Weight (calculated)

11303.3 Da

IEP (calculated)

4.742

GRAVY (calculated)

-0.192

Length

206 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: ATMEWDEAGR MPPNMYRCFT GLCEAAAQGS AMPPAPVTGG NNKVKVFGGD GKVWFGGKRV RGKLAMWEED DVGSSGGKWD WVDGVPGYGD GVYRGFVFDG
201: GFTAMP

Best Arabidopsis Sequence Match ( AT1G76920.1 )
(BLAST)

001: MESSPVNCLP PDSLHQIFSS LPIRDIMICR SVCKFFNQLL TSQCFIEIIS TRPPLNLLAL RPPHHHHSHR HSGNGHATNI RPYIHVYDPE QNQWFRFNLD
101: FLPFRSPQPV ASSSGLIYLW GDSIDLAESS KSLVACNPLT RQFKVLPQLG SAWSRHGTVL VDSVNRVMVL TELAALYYSG TVVANQWLKF SSNLPSKPRS
201: PVLMSSSVFA LCDVGSPWRS QWKLFSCKLT NLTITHTNWV CLEKHEWGDI FDIIKRPRLL RGNGDSKLLM IGGLKSTFSL NPACSTILIL RLDLESLEWE
301: EAGRMPLEMY RGFQESSKFK VFGGGDRVYF SAKRMGKLAM WDCWQGWRWI EGVPGYADGL CRGFVFDAKL TLMP

Arabidopsis Description

SKIP15SKP1-interacting partner 15 [Source:UniProtKB/Swiss-Prot;Acc:O49279]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.