Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047158_P001 | Maize | cytosol | 97.75 | 97.75 |
| Zm00001d009851_P001 | Maize | nucleus, peroxisome, plasma membrane | 98.88 | 17.29 |
| Zm00001d024013_P001 | Maize | cytosol | 48.31 | 16.48 |
| HORVU7Hr1G083580.2 | Barley | cytosol | 15.73 | 15.22 |
| HORVU2Hr1G124610.1 | Barley | cytosol | 16.85 | 7.28 |
| TraesCS4A01G184400.1 | Wheat | mitochondrion, plastid | 13.48 | 6.03 |
| HORVU7Hr1G066100.1 | Barley | cytosol, mitochondrion, plastid | 10.11 | 5.11 |
| Zm00001d035880_P001 | Maize | plastid | 10.11 | 4.69 |
| HORVU5Hr1G045010.1 | Barley | extracellular, plastid, vacuole | 16.85 | 4.46 |
| HORVU7Hr1G083560.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 3.37 | 4.11 |
| Zm00001d026678_P001 | Maize | plastid | 15.73 | 3.42 |
| TraesCS2B01G610300.1 | Wheat | cytosol, peroxisome, plastid | 15.73 | 3.41 |
| EES13145 | Sorghum | cytosol, nucleus, plastid | 15.73 | 3.39 |
| TraesCS2D01G588100.1 | Wheat | plastid | 16.85 | 3.37 |
| TraesCS2A01G577100.1 | Wheat | cytosol, plasma membrane, plastid | 16.85 | 3.33 |
| Os04t0686700-01 | Rice | plastid | 14.61 | 3.06 |
| Zm00001d002882_P001 | Maize | cytosol, nucleus, plastid | 13.48 | 2.93 |
| CDY48548 | Canola | cytosol, nucleus, peroxisome, plastid | 11.24 | 2.72 |
| CDX68078 | Canola | cytosol, nucleus, peroxisome, plastid | 11.24 | 2.72 |
| Bra003700.1-P | Field mustard | cytosol, nucleus, peroxisome, plastid | 11.24 | 2.72 |
| AT1G76920.1 | Thale cress | cytosol | 11.24 | 2.67 |
| VIT_18s0076g00350.t01 | Wine grape | cytosol | 10.11 | 2.41 |
| Solyc04g071130.1.1 | Tomato | extracellular | 8.99 | 2.12 |
| PGSC0003DMT400002094 | Potato | cytosol | 8.99 | 2.12 |
| KRH70323 | Soybean | cytosol | 7.87 | 1.91 |
| GSMUA_Achr8P07870_001 | Banana | cytosol, peroxisome, plastid | 6.74 | 1.46 |
| HORVU2Hr1G124540.2 | Barley | cytosol | 2.25 | 0.56 |
| HORVU7Hr1G083600.1 | Barley | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d003753_P001 | EnsemblPlants:Zm00001d003753_T001 | EnsemblPlantsGene:Zm00001d003753 | InterPro:CLU_dom | InterPro:IPR025697 | PANTHER:PTHR12601 |
| PANTHER:PTHR12601:SF6 | PFAM:PF13236 | PFscan:PS51823 | ProteinID:ONM17664.1 | UniParc:UPI000843F137 | UniProt:A0A1D6EBE6 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:57600551..57602031
Molecular Weight (calculated)
9570.5 Da
IEP (calculated)
7.677
GRAVY (calculated)
-0.188
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MAIVDYRGHK VVAQSIIPGI LQGDKSDSLL YGSVDNGKKI SWNETFHSKV VEAAKQLHLK EHVVLDGSGN PVKLAATVEC KGIVGSDDR
0001: MAGKSNKSKA KRAAQSTTTN STTDVKSDAP APPVAATVPA TAPVTAAAAP VATAAAPVTA PDNGTLTAVD SAVPEANEVA PTIPKADESE SQVENNDAQP
0101: KQGELRLYPV SVKTQSGGKM ELQLNPGDSV MDIRQFLLDA PETCYFTCYE LLLRNKDGET HHLEDYNEIS EVADITIGGC SLEMVAALYD DRSIRAHVHR
0201: ARDLLSLSTL HSSLSTTLAL QYDAALNKVQ NPGDKPKSDV PELECLGFME DVPGSLKKLI NSTSEEIRSV ENIVFSSFNP PPSHRRLVGD LIYLDVVTLE
0301: GNKYCITGTT KTFYVNSSSG NILDPRPSKS GFEAATLIGL LQKLSSKFKK AFREVMEKKA SAHPFENVQS LLPPHSWLRT YPVPDHKRDA ARAEEALTIS
0401: YGSELIGMQR DWNEELQSCR EFPHTSPQER FVSLIENFLR CRILRDRALY KVSSDFVDAA LNGAIGVISR CIPPINPTDP ECLHMYVHNN IFFSFAVDAD
0501: IEQLSKKRPS NQMTEKVSSS EKVSCTEGTC DNEEHNNCNE APLVENEQAT YASANNDLKG TKLYQEADVP GLYNLAMAII DYRGHRVVAQ SVLPGILQGD
0601: KSDALLYGSV DNGKKICWNE DFHAKVLEAA KLLHIKEHSV IDASETVFKL AAPVECKGIV GSDNRHYLLD LMRVTPRDAN YTGPESRFCV LRPELITSFC
0701: QAESLEKSKF KTKADEGGDD SSNVSADTSK VGDALIDGEA NGASNSDQKS ISDKQNTTAE DYAAGSSESS KSCDQIAFNP NVFTDFTLGG NQEEIAADEE
0801: NVKKVSSYLV DVVLPKFIED LCTLEVSPMD GQTLTEALHA HGVNVRYIGR VANGVKHLPH LWDLCLNEIT VRSAKHILKD ILRDIEDHDI GSAVSHFLNC
0901: FFGNYQTAGG KASANSSTAK NQKKFFGADQ PITKKGQGRG KGKASSKKSF SSYMMVDSNI LWSDIQEFAK AKYEFELPEL SRTTAKKVSV LRNLCQKVGV
1001: SIAARKYDFS ANTPFETSDI LDLRPVIKHS VPVCSEAKDL VEMGKVQLAE GMLSESYTFF SEAFSILQQV TGPMHREVAN CCRYLAMVLY HAGDMAGAIM
1101: QQHKELIINE RCLGLDHPDT AHSYGNMALF YHGLNQTELA LQNMGRALLL LGLSSGPDHP DVAATFINVA MMYQDMGKMD TALRYLQEAL KKNERLLGPE
1201: HIQTAVCYHA LAIAFNCMGA FKLSHQHEKK TYDILVKQLG DDDSRTRDSL NWMKTFKMRE LQMTAQKQKG QAANAANTQK AIDLLKAHPD LIHAFQNAAA
1301: TGRTNALNSA VLGETQPRGR GFDERAARAA AEVRKKAAAK GLLVRPQGGV PVQAMPPLSQ LQNMINTATV SSEKGGENGE AKVQEKKESS ENGKTENLAP
1401: AGLGAGLTSL DKKKQKAKK
0101: KQGELRLYPV SVKTQSGGKM ELQLNPGDSV MDIRQFLLDA PETCYFTCYE LLLRNKDGET HHLEDYNEIS EVADITIGGC SLEMVAALYD DRSIRAHVHR
0201: ARDLLSLSTL HSSLSTTLAL QYDAALNKVQ NPGDKPKSDV PELECLGFME DVPGSLKKLI NSTSEEIRSV ENIVFSSFNP PPSHRRLVGD LIYLDVVTLE
0301: GNKYCITGTT KTFYVNSSSG NILDPRPSKS GFEAATLIGL LQKLSSKFKK AFREVMEKKA SAHPFENVQS LLPPHSWLRT YPVPDHKRDA ARAEEALTIS
0401: YGSELIGMQR DWNEELQSCR EFPHTSPQER FVSLIENFLR CRILRDRALY KVSSDFVDAA LNGAIGVISR CIPPINPTDP ECLHMYVHNN IFFSFAVDAD
0501: IEQLSKKRPS NQMTEKVSSS EKVSCTEGTC DNEEHNNCNE APLVENEQAT YASANNDLKG TKLYQEADVP GLYNLAMAII DYRGHRVVAQ SVLPGILQGD
0601: KSDALLYGSV DNGKKICWNE DFHAKVLEAA KLLHIKEHSV IDASETVFKL AAPVECKGIV GSDNRHYLLD LMRVTPRDAN YTGPESRFCV LRPELITSFC
0701: QAESLEKSKF KTKADEGGDD SSNVSADTSK VGDALIDGEA NGASNSDQKS ISDKQNTTAE DYAAGSSESS KSCDQIAFNP NVFTDFTLGG NQEEIAADEE
0801: NVKKVSSYLV DVVLPKFIED LCTLEVSPMD GQTLTEALHA HGVNVRYIGR VANGVKHLPH LWDLCLNEIT VRSAKHILKD ILRDIEDHDI GSAVSHFLNC
0901: FFGNYQTAGG KASANSSTAK NQKKFFGADQ PITKKGQGRG KGKASSKKSF SSYMMVDSNI LWSDIQEFAK AKYEFELPEL SRTTAKKVSV LRNLCQKVGV
1001: SIAARKYDFS ANTPFETSDI LDLRPVIKHS VPVCSEAKDL VEMGKVQLAE GMLSESYTFF SEAFSILQQV TGPMHREVAN CCRYLAMVLY HAGDMAGAIM
1101: QQHKELIINE RCLGLDHPDT AHSYGNMALF YHGLNQTELA LQNMGRALLL LGLSSGPDHP DVAATFINVA MMYQDMGKMD TALRYLQEAL KKNERLLGPE
1201: HIQTAVCYHA LAIAFNCMGA FKLSHQHEKK TYDILVKQLG DDDSRTRDSL NWMKTFKMRE LQMTAQKQKG QAANAANTQK AIDLLKAHPD LIHAFQNAAA
1301: TGRTNALNSA VLGETQPRGR GFDERAARAA AEVRKKAAAK GLLVRPQGGV PVQAMPPLSQ LQNMINTATV SSEKGGENGE AKVQEKKESS ENGKTENLAP
1401: AGLGAGLTSL DKKKQKAKK
Arabidopsis Description
Clustered mitochondria protein homolog [Source:UniProtKB/TrEMBL;Acc:F4J5R9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.