Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006366_P001 | Maize | cytosol | 21.61 | 99.14 |
| Zm00001d052005_P001 | Maize | cytosol | 21.61 | 99.14 |
| Zm00001d002746_P001 | Maize | cytosol | 21.61 | 99.14 |
| Zm00001d017669_P001 | Maize | cytosol | 21.61 | 99.14 |
| Zm00001d033961_P001 | Maize | cytosol | 21.61 | 99.14 |
| Zm00001d039774_P001 | Maize | cytosol | 21.52 | 98.71 |
| Zm00001d035261_P001 | Maize | cytosol | 21.52 | 98.71 |
| Zm00001d035258_P001 | Maize | cytosol | 21.42 | 98.28 |
| OQU78515 | Sorghum | cytosol | 55.0 | 84.0 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 47.33 | 75.19 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 48.74 | 75.07 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 48.74 | 74.64 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 48.64 | 74.61 |
| Os05t0587300-01 | Rice | cytosol | 36.76 | 70.81 |
| Zm00001d044479_P001 | Maize | cytosol | 43.59 | 68.43 |
| Zm00001d011352_P001 | Maize | cytosol | 43.41 | 68.14 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 34.14 | 56.24 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 13.75 | 55.68 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 35.17 | 54.89 |
| Zm00001d039362_P002 | Maize | cytosol | 33.77 | 53.88 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 25.26 | 53.68 |
| Zm00001d008930_P003 | Maize | cytosol | 33.77 | 53.48 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 34.71 | 52.11 |
| CDY45930 | Canola | cytosol | 31.24 | 50.68 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 32.83 | 50.65 |
| CDY25865 | Canola | cytosol | 31.15 | 50.61 |
| Bra038116.1-P | Field mustard | cytosol | 31.15 | 50.61 |
| KRH21985 | Soybean | cytosol | 32.37 | 50.0 |
| CDY25722 | Canola | cytosol, plastid | 31.15 | 49.92 |
| CDY02514 | Canola | cytosol, plastid | 31.24 | 49.85 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 31.24 | 49.85 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 32.93 | 49.58 |
| KRH27330 | Soybean | cytosol | 32.37 | 49.57 |
| KRH55099 | Soybean | nucleus | 31.43 | 49.56 |
| CDY34224 | Canola | cytosol | 3.18 | 49.28 |
| KRH26223 | Soybean | nucleus | 31.15 | 49.26 |
| Bra023795.1-P | Field mustard | cytosol | 4.02 | 48.86 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 10.1 | 48.65 |
| Solyc07g062580.2.1 | Tomato | cytosol | 31.9 | 48.64 |
| KRH22291 | Soybean | plastid | 26.57 | 48.63 |
| PGSC0003DMT400032362 | Potato | cytosol | 31.71 | 48.43 |
| PGSC0003DMT400054803 | Potato | cytosol | 13.19 | 47.96 |
| AT1G53300.1 | Thale cress | cytosol | 31.15 | 47.64 |
| GSMUA_AchrUn_... | Banana | cytosol | 11.41 | 45.52 |
| AT3G58620.1 | Thale cress | cytosol | 28.53 | 44.72 |
| Bra000267.1-P | Field mustard | cytosol | 27.88 | 44.35 |
| CDY61202 | Canola | cytosol | 27.78 | 44.26 |
| CDY49237 | Canola | cytosol | 27.22 | 43.63 |
| CDY51514 | Canola | cytosol | 27.22 | 43.5 |
| Bra007405.1-P | Field mustard | cytosol | 27.32 | 43.39 |
| CDY42827 | Canola | cytosol | 27.13 | 43.22 |
| CDY55390 | Canola | cytosol | 27.03 | 43.2 |
| CDX71941 | Canola | cytosol | 27.22 | 43.18 |
| Bra004709.1-P | Field mustard | cytosol | 26.47 | 43.07 |
| AT2G42580.1 | Thale cress | cytosol | 27.78 | 42.98 |
| PGSC0003DMT400054902 | Potato | cytosol | 11.79 | 42.14 |
| KRH27037 | Soybean | nucleus | 26.47 | 41.93 |
| AT3G14950.1 | Thale cress | cytosol | 27.6 | 40.41 |
| Solyc10g007240.1.1 | Tomato | cytosol | 22.36 | 40.24 |
| PGSC0003DMT400054904 | Potato | cytosol | 22.73 | 40.23 |
| PGSC0003DMT400054911 | Potato | cytosol | 19.55 | 40.12 |
| Solyc10g007230.1.1 | Tomato | cytosol | 22.17 | 39.77 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 22.73 | 39.51 |
| Solyc10g007220.1.1 | Tomato | cytosol | 18.62 | 39.41 |
| PGSC0003DMT400054909 | Potato | cytosol | 15.06 | 39.08 |
| Bra027292.1-P | Field mustard | cytosol | 26.29 | 38.28 |
| Solyc10g007420.2.1 | Tomato | cytosol | 15.15 | 38.12 |
| CDX98517 | Canola | cytosol | 25.73 | 37.98 |
| CDX97619 | Canola | cytosol | 25.73 | 37.93 |
| CDY32327 | Canola | cytosol | 25.26 | 37.04 |
| CDY20095 | Canola | nucleus | 25.16 | 36.95 |
| CDY34222 | Canola | cytosol | 10.57 | 36.69 |
| Bra021583.1-P | Field mustard | nucleus | 25.35 | 35.85 |
| CDY40820 | Canola | mitochondrion | 9.35 | 35.59 |
| Solyc10g007250.1.1 | Tomato | cytosol | 9.26 | 35.48 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 12.16 | 34.39 |
| CDY34223 | Canola | cytosol | 10.38 | 34.05 |
| PGSC0003DMT400091014 | Potato | nucleus | 19.18 | 33.77 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 10.1 | 33.13 |
| Bra023793.1-P | Field mustard | cytosol | 12.72 | 33.01 |
| Zm00001d018088_P001 | Maize | cytosol | 17.31 | 31.36 |
| Zm00001d052221_P002 | Maize | cytosol, nucleus, plastid | 17.03 | 31.11 |
| Zm00001d034423_P001 | Maize | cytosol | 6.27 | 27.02 |
| Zm00001d012121_P002 | Maize | cytosol | 6.17 | 25.88 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100193843 | MapMan:11.3.2.5 | MapMan:17.7.5.2 | Gene3D:3.30.160.20 | Gene3D:3.30.70.1660 |
| Gene3D:3.40.30.10 | UniProt:A0A1D6FLB1 | ProteinID:AQK92488.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003747 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006412 |
| GO:GO:0006415 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0019538 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR013766 | InterPro:IPR019734 | InterPro:PCRF | PFAM:PF00085 | PFAM:PF00472 | PFAM:PF00515 |
| PFAM:PF03462 | PFAM:PF13432 | ScanProsite:PS00745 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 |
| PANTHER:PTHR22904:SF395 | InterPro:Pep_chain_release_fac_I_II | SMART:SM00028 | SMART:SM00937 | SUPFAM:SSF48452 | SUPFAM:SSF52833 |
| SUPFAM:SSF75620 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_domain | UniParc:UPI000843B5AC | EnsemblPlantsGene:Zm00001d009724 | EnsemblPlants:Zm00001d009724_P009 | EnsemblPlants:Zm00001d009724_T009 | SEG:seg |
Description
TPR repeat-containing thioredoxin TTL1
Coordinates
chr8:-:77913640..77925636
Molecular Weight (calculated)
115468.0 Da
IEP (calculated)
9.422
GRAVY (calculated)
-0.147
Length
1069 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEADLTLHD AGGGARDKPD RKADVFADLG SPVSPLRLRP AATPSTSSSS SGSAKSPAPG NAAAGRGGRG NHSGELAQES TNPPGHRRAG SGPLIFSGAS
0101: SSTTASSPLT NALPTGNICR VAGAAAAAAA TQPPRARPAV LGSGTGHYGH GSIMRRGGGA TPARTSGDAA PLLHGHGSNS SRSRSPASCP APAPPATSGG
0201: LQEITRAGNE WYKKGRHADA LRHYDRAVAL CPDSAACRGN RAAALIGLGR LAEAFRECEE AVRLDPASGR AHGRLAGLCL RLGMVEKAKT HFTLAGSANQ
0301: SDPAEWQKLH EVEIHQGRCM DARKIGDWKS ALREADAAIA VGADSSRLLL ALRSEALLWL HKLEEADLTI TSLLKLDDAS LPSTPTRVSG MSADSYVHIV
0401: QAKVNVTFGR FDSAVALAEK AKLIDGVSSE VEVILNNVRL VALARARGND LFKAGKFAEA SLAYGEGLKY EPSNPVLYCN RAACWSKLGR WAKAVEDCSE
0501: ALRVQPNYTK ALLRRAASYA KLERWADCVR DYEVLRKDLP GDTEVAESLF HAQVALKTAR GEVVSNMKFG GVVEEIISLE QLQDVIRSPG VSVLYFMATM
0601: NKQCAQITPS VDSLCSECPA LNFLKVNVDE RPLVASAENV RVVPSFKIYK DGTRVKEMVC PSLQVLRYSI GFSEVCVVMP PPCFAIAIKR SRGLRAAIIQ
0701: QKRRAIVALN LLSDSFHDLN AFLLITSHFL LAVYVHLFDL WLLGALPEYN VKLFLQIGTA EWSGSQMSIP VLFPCLKLMV FILLVVTKVK TGWRCLVVEQ
0801: IAGFEFLFQM SSSRPPRRGG DRRDSGKGVP CGLCSYLADW ADMLLRMYVR WGEKQRYKTR VVEKSPGEQA GIKSATVELE GRYAYGYLSG EKGTHRIVRQ
0901: SPFNAKGLRQ TSFAGVEVMP LLPEESMAVD IPEEDLEISF TRAGGKGGQN VNKVETAVRM VHIPTGIAVR CSEERSQLAN KIKALSRLKA KLLVIALEQR
1001: ASEIKQIRGD IVKAEWGQQI RNYVFHPYKL VKDVRTGCET SDITGVMDGE LDPFIRAYLK YKLTAAATS
0101: SSTTASSPLT NALPTGNICR VAGAAAAAAA TQPPRARPAV LGSGTGHYGH GSIMRRGGGA TPARTSGDAA PLLHGHGSNS SRSRSPASCP APAPPATSGG
0201: LQEITRAGNE WYKKGRHADA LRHYDRAVAL CPDSAACRGN RAAALIGLGR LAEAFRECEE AVRLDPASGR AHGRLAGLCL RLGMVEKAKT HFTLAGSANQ
0301: SDPAEWQKLH EVEIHQGRCM DARKIGDWKS ALREADAAIA VGADSSRLLL ALRSEALLWL HKLEEADLTI TSLLKLDDAS LPSTPTRVSG MSADSYVHIV
0401: QAKVNVTFGR FDSAVALAEK AKLIDGVSSE VEVILNNVRL VALARARGND LFKAGKFAEA SLAYGEGLKY EPSNPVLYCN RAACWSKLGR WAKAVEDCSE
0501: ALRVQPNYTK ALLRRAASYA KLERWADCVR DYEVLRKDLP GDTEVAESLF HAQVALKTAR GEVVSNMKFG GVVEEIISLE QLQDVIRSPG VSVLYFMATM
0601: NKQCAQITPS VDSLCSECPA LNFLKVNVDE RPLVASAENV RVVPSFKIYK DGTRVKEMVC PSLQVLRYSI GFSEVCVVMP PPCFAIAIKR SRGLRAAIIQ
0701: QKRRAIVALN LLSDSFHDLN AFLLITSHFL LAVYVHLFDL WLLGALPEYN VKLFLQIGTA EWSGSQMSIP VLFPCLKLMV FILLVVTKVK TGWRCLVVEQ
0801: IAGFEFLFQM SSSRPPRRGG DRRDSGKGVP CGLCSYLADW ADMLLRMYVR WGEKQRYKTR VVEKSPGEQA GIKSATVELE GRYAYGYLSG EKGTHRIVRQ
0901: SPFNAKGLRQ TSFAGVEVMP LLPEESMAVD IPEEDLEISF TRAGGKGGQN VNKVETAVRM VHIPTGIAVR CSEERSQLAN KIKALSRLKA KLLVIALEQR
1001: ASEIKQIRGD IVKAEWGQQI RNYVFHPYKL VKDVRTGCET SDITGVMDGE LDPFIRAYLK YKLTAAATS
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.