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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000516.1-P
Bra001461.1-P
Bra001637.1-P
Bra001640.1-P
Bra003487.1-P
Bra003560.1-P
Bra003700.1-P
Bra004000.1-P
Bra004380.1-P
Bra004620.1-P
Bra005738.1-P
Bra006107.1-P
Bra006918.1-P
Bra007663.1-P
Bra008128.1-P
Bra008222.1-P
Bra009543.1-P
Bra010714.1-P
Bra010807.1-P
Bra012809.1-P
Bra013239.1-P
Bra013721.1-P
Bra015088.1-P
Bra015940.1-P
Bra016936.1-P
Bra016962.1-P
Bra018309.1-P
Bra019278.1-P
Bra019280.1-P
Bra021187.1-P
Bra021200.1-P
Bra021415.1-P
Bra021909.1-P
Bra022172.1-P
Bra022176.1-P
Bra022805.1-P
Bra022976.1-P
Bra023336.1-P
Bra024700.1-P
Bra024839.1-P
Bra024840.1-P
Bra025430.1-P
Bra027049.1-P
Bra027341.1-P
Bra028191.1-P
Bra029227.1-P
Bra029884.1-P
Bra029887.1-P
Bra030181.1-P
Bra030182.1-P
Bra031136.1-P
Bra033442.1-P
Bra033483.1-P
Bra033597.1-P
Bra034099.1-P
Bra034157.1-P
Bra034504.1-P
Bra034748.1-P
Bra034927.1-P
Bra035190.1-P
Bra036492.1-P
Bra036669.1-P
Bra038123.1-P
Bra038305.1-P
Bra038442.1-P
Bra038550.1-P
Bra038739.1-P
Bra039670.1-P
Bra039971.1-P
Bra040597.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G42580.1 Bra024700.1-P AT1G26650.1 19000166
AT2G42580.1 Bra010807.1-P AT1G29930.1 19000166
AT2G42580.1 Bra021909.1-P AT1G29930.1 19000166
AT2G42580.1 Bra022976.1-P AT1G29930.1 19000166
AT2G42580.1 Bra030181.1-P AT1G29930.1 19000166
AT2G42580.1 Bra030182.1-P AT1G29930.1 19000166
AT2G42580.1 Bra034927.1-P AT1G42970.1 19000166
AT2G42580.1 Bra038123.1-P AT1G53400.1 19000166
AT2G42580.1 Bra039670.1-P AT1G53400.1 19000166
AT2G42580.1 Bra027049.1-P AT1G62380.1 19000166
AT2G42580.1 Bra034504.1-P AT1G62380.1 19000166
AT2G42580.1 Bra004000.1-P AT1G69420.1 19000166
AT2G42580.1 Bra004380.1-P AT1G69420.1 19000166
AT2G42580.1 Bra038305.1-P AT1G69420.1 19000166
AT2G42580.1 Bra008128.1-P AT1G74050.1 19000166
AT2G42580.1 Bra015940.1-P AT1G74050.1 19000166
AT2G42580.1 Bra008222.1-P AT1G75750.1 19000166
AT2G42580.1 Bra029227.1-P AT1G75750.1 19000166
AT2G42580.1 Bra038550.1-P AT1G75750.1 19000166
AT2G42580.1 Bra003700.1-P AT1G76920.1 19000166
AT2G42580.1 Bra003560.1-P AT1G80300.1 19000166
AT2G42580.1 Bra035190.1-P AT1G80300.1 19000166
AT2G42580.1 Bra024839.1-P AT2G01950.1 19000166
AT2G42580.1 Bra024840.1-P AT2G01950.1 19000166
AT2G42580.1 Bra031136.1-P AT2G20670.1 19000166
AT2G42580.1 Bra036492.1-P AT2G20670.1 19000166
AT2G42580.1 Bra000516.1-P AT2G27330.1 19000166
AT2G42580.1 Bra039971.1-P AT2G29340.1 19000166
AT2G42580.1 Bra018309.1-P AT2G30520.1 19000166
AT2G42580.1 Bra022805.1-P AT2G30520.1 19000166
AT2G42580.1 Bra004620.1-P AT2G41410.1 19000166
AT2G42580.1 Bra016936.1-P AT2G41410.1 19000166
AT2G42580.1 Bra021415.1-P AT3G02740.1 19000166
AT2G42580.1 Bra040597.1-P AT3G02740.1 19000166
AT2G42580.1 Bra029884.1-P AT3G10980.1 19000166
AT2G42580.1 Bra029887.1-P AT3G10985.1 19000166
AT2G42580.1 Bra034157.1-P AT3G10985.1 19000166
AT2G42580.1 Bra001461.1-P AT3G12630.1 19000166
AT2G42580.1 Bra034748.1-P AT3G12630.1 19000166
AT2G42580.1 Bra038739.1-P AT3G12630.1 19000166
AT2G42580.1 Bra027341.1-P AT3G14400.1 19000166
AT2G42580.1 Bra001637.1-P AT3G16640.1 19000166
AT2G42580.1 Bra021187.1-P AT3G16640.1 19000166
AT2G42580.1 Bra022172.1-P AT3G16640.1 19000166
AT2G42580.1 Bra001640.1-P AT3G16770.1 19000166
AT2G42580.1 Bra021200.1-P AT3G16770.1 19000166
AT2G42580.1 Bra022176.1-P AT3G16770.1 19000166
AT2G42580.1 Bra013239.1-P AT3G24830.1 19000166
AT2G42580.1 Bra015088.1-P AT3G24830.1 19000166
AT2G42580.1 Bra036669.1-P AT3G24830.1 19000166
AT2G42580.1 Bra019278.1-P AT3G26450.1 19000166
AT2G42580.1 Bra019280.1-P AT3G26450.1 19000166
AT2G42580.1 Bra006918.1-P AT3G52300.1 19000166
AT2G42580.1 Bra012809.1-P AT3G52300.1 19000166
AT2G42580.1 Bra033442.1-P AT3G52300.1 19000166
AT2G42580.1 Bra003487.1-P AT3G62120.1 19000166
AT2G42580.1 Bra007663.1-P AT3G62120.1 19000166
AT2G42580.1 Bra038442.1-P AT4G14130.1 19000166
AT2G42580.1 Bra033483.1-P AT4G14440.1 19000166
AT2G42580.1 Bra013721.1-P AT4G23670.1 19000166
AT2G42580.1 Bra034099.1-P AT4G23670.1 19000166
AT2G42580.1 Bra010714.1-P AT4G39050.1 21798944
AT2G42580.1 Bra033597.1-P AT4G39050.1 21798944
AT2G42580.1 Bra005738.1-P AT5G03230.1 19000166
AT2G42580.1 Bra009543.1-P AT5G03230.1 19000166
AT2G42580.1 Bra006107.1-P AT5G11670.1 19000166
AT2G42580.1 Bra023336.1-P AT5G11670.1 19000166
AT2G42580.1 Bra025430.1-P AT5G38530.1 19000166
AT2G42580.1 Bra028191.1-P AT5G38530.1 19000166
AT2G42580.1 Bra016962.1-P AT5G42440.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY61202 Canola cytosol 99.7 99.85
Bra004709.1-P Field mustard cytosol 84.38 86.3
AT2G42580.1 Thale cress cytosol 87.05 84.66
Bra007405.1-P Field mustard cytosol 73.36 73.25
VIT_18s0001g09830.t01 Wine grape cytosol 23.66 60.23
VIT_12s0028g02240.t01 Wine grape cytosol 61.31 58.03
KRH22291 Soybean plastid 49.55 57.02
GSMUA_Achr10P... Banana cytosol 53.87 54.27
Os01t0218200-00 Rice plastid 51.34 51.34
TraesCS3B01G162100.1 Wheat cytosol 50.89 50.89
EES02247 Sorghum plastid 51.79 50.88
Zm00001d039362_P002 Maize cytosol 50.45 50.6
TraesCS3D01G144600.1 Wheat cytosol 50.6 50.37
TraesCS3A01G143000.1 Wheat cytosol 50.15 50.15
Zm00001d008930_P003 Maize cytosol 50.15 49.93
Bra038116.1-P Field mustard cytosol 48.21 49.24
KRH27037 Soybean nucleus 49.4 49.19
Bra030946.1-P Field mustard cytosol, plastid 48.96 49.1
GSMUA_Achr4P08560_001 Banana cytosol 49.85 48.91
GSMUA_Achr7P24480_001 Banana cytosol 47.17 48.84
EES01073 Sorghum cytosol 48.96 48.31
Zm00001d044479_P001 Maize cytosol 48.07 47.43
GSMUA_AchrUn_... Banana endoplasmic reticulum 35.42 47.32
HORVU1Hr1G093390.2 Barley cytosol 47.32 47.25
TraesCS3A01G221800.1 Wheat cytosol 48.21 47.09
GSMUA_Achr3P25160_001 Banana cytosol 49.85 47.05
TraesCS3D01G231300.1 Wheat cytosol, mitochondrion 48.07 46.95
TraesCS3B01G251600.1 Wheat cytosol, mitochondrion 48.07 46.95
Zm00001d004494_P001 Maize cytosol, mitochondrion 15.48 46.85
HORVU3Hr1G027650.2 Barley mitochondrion 46.13 46.55
TraesCS1B01G462300.1 Wheat cytosol 47.92 46.4
Os05t0210600-01 Rice cytosol 27.68 46.38
Zm00001d011352_P001 Maize cytosol 46.73 46.11
HORVU3Hr1G054240.2 Barley cytosol, mitochondrion 47.17 46.08
TraesCS1A01G427400.1 Wheat cytosol 47.77 46.05
TraesCS1D01G437100.1 Wheat nucleus 47.77 45.99
Os05t0587300-01 Rice cytosol 37.95 45.95
OQU78515 Sorghum cytosol 47.32 45.43
GSMUA_AchrUn_... Banana cytosol 16.96 42.54
Bra006046.1-P Field mustard cytosol 25.89 39.01
Bra027292.1-P Field mustard cytosol 41.82 38.28
Bra021583.1-P Field mustard nucleus 41.37 36.77
Bra003657.1-P Field mustard cytosol 25.3 33.2
Bra009058.1-P Field mustard cytosol, mitochondrion 27.23 32.68
Bra015628.1-P Field mustard cytosol 25.15 32.13
Bra024360.1-P Field mustard mitochondrion 27.53 31.57
Bra023793.1-P Field mustard cytosol 19.05 31.07
Bra023795.1-P Field mustard cytosol 4.02 30.68
Bra023794.1-P Field mustard cytosol, nucleus, plastid 14.88 30.67
Zm00001d009724_P009 Maize cytosol 44.35 27.88
Bra032136.1-P Field mustard cytosol 9.08 22.02
Bra028602.1-P Field mustard cytosol 28.42 17.54
Bra011197.1-P Field mustard cytosol 2.08 17.07
Zm00001d006366_P001 Maize cytosol 0.15 0.43
Zm00001d033961_P001 Maize cytosol 0.15 0.43
Protein Annotations
Gene3D:1.25.40.10MapMan:11.3.2.5Gene3D:3.40.30.10EnsemblPlantsGene:Bra000267EnsemblPlants:Bra000267.1EnsemblPlants:Bra000267.1-P
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005623GO:GO:0008150
GO:GO:0009987GO:GO:0019725GO:GO:0045454InterPro:IPR011990InterPro:IPR013026InterPro:IPR013766
InterPro:IPR019734UniProt:M4C7T9PFAM:PF00085PFAM:PF13432PFscan:PS50005PFscan:PS50293
PANTHER:PTHR22904PANTHER:PTHR22904:SF374SMART:SM00028SUPFAM:SSF48452SUPFAM:SSF52833InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI00025403C3SEG:seg
Description
AT2G42580 (E=2e-297) TTL3, VIT | TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding
Coordinates
chrA03:+:10250533..10253013
Molecular Weight (calculated)
73675.9 Da
IEP (calculated)
8.998
GRAVY (calculated)
-0.435
Length
672 amino acids
Sequence
(BLAST)
001: MSHSRRLSLE PAIDSSTSRR FRDSLTLQRH DDDVNKPDFR ELDLGSPVST LTPRVSSSSA AATPTSSSGS SGSVSGKPSV TSQMVKSHSG EISRSAMPTT
101: TTRNLKPGHR RSSSTGTPLI FSGSSFYSGA SQSSGATSAV SPSPTVLPAG NICPSGRILK TGMATRSSTR AETLWTGTGN YGHGNVVKSG GGSTGKTNHA
201: VANGESLEEL KRLGNDMYRR GSFTEALSFY DRAISLSPEN ASYRSNRAAA LTALRRLGEA VKECLEAVRL DPSYSRAHQR LASLYLRLGE AENARRHLCF
301: SGQCPDQADL QRLQTLEKHL RRCWEARKIG DWRTAVKETD AAIANGADSS PQLVACKAEA LLRLNQIEES EFCLSCIPRL DHHQSQAKLF GMVAEAYVLC
401: IQAQVDMALG RFENGVIKAE RASMLDQTNP ELVSVLNNVK MVAKARSRGN ELFSSGRYSE ASVAYGDGLK YDGSNSVLYC NRAACWYKLG LWEKSVEDCN
501: QALKIHSGYI KALLRRAASY GKLGRWEDAV RDYEFVRREL PGDSEVAESL ERAKTALSQE SKSLGFNNEV EAVSSLDKFK NSVSLPGVSV FHFKSSSNRQ
601: CEEISPYVNT LCLRYPLVHF FMVDVEESLA LAKAESIRKV PTFKMYKNGD KVKEMICPSH QFLEDSIKHF LL
Best Arabidopsis Sequence Match ( AT2G42580.1 )
(BLAST)
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.