Factsheet for Bra032136.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39682	Canola	cytosol	98.92	98.92
Bra011197.1-P	Field mustard	cytosol	25.27	85.37
KRH09945	Soybean	cytosol, endoplasmic reticulum	17.33	82.76
KRH23391	Soybean	cytosol	44.04	68.16
TraesCS5A01G336700.1	Wheat	cytosol	52.35	63.32
TraesCS5B01G335700.1	Wheat	cytosol	51.99	62.88
TraesCS5D01G341400.1	Wheat	cytosol	51.62	62.45
GSMUA_Achr2P02050_001	Banana	cytosol	50.18	60.96
Os10t0486900-01	Rice	cytosol	50.9	59.75
KRG99844	Soybean	cytosol	55.96	57.84
Solyc07g006180.2.1	Tomato	cytosol	54.15	57.47
Zm00001d034423_P001	Maize	cytosol	49.82	55.65
KXG33951	Sorghum	cytosol	50.18	54.94
Zm00001d012121_P002	Maize	cytosol	49.82	54.12
VIT_11s0037g01020.t01	Wine grape	cytosol	47.29	53.69
KRH46794	Soybean	cytosol	51.62	51.81
PGSC0003DMT400029173	Potato	cytosol	53.79	50.85
Bra023795.1-P	Field mustard	cytosol	3.97	12.5
Bra015628.1-P	Field mustard	cytosol	18.77	9.89
Bra007405.1-P	Field mustard	cytosol	23.83	9.81
Bra006046.1-P	Field mustard	cytosol	15.52	9.64
Bra038116.1-P	Field mustard	cytosol	22.74	9.57
Bra003657.1-P	Field mustard	cytosol	17.69	9.57
Bra030946.1-P	Field mustard	cytosol, plastid	22.74	9.4
Bra000267.1-P	Field mustard	cytosol	22.02	9.08
Bra004709.1-P	Field mustard	cytosol	21.3	8.98
Bra009058.1-P	Field mustard	cytosol, mitochondrion	16.97	8.39
Bra024360.1-P	Field mustard	mitochondrion	16.97	8.02
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	9.39	7.98
Bra021583.1-P	Field mustard	nucleus	20.94	7.67
Bra027292.1-P	Field mustard	cytosol	20.22	7.63
Bra023793.1-P	Field mustard	cytosol	8.66	5.83
Bra028602.1-P	Field mustard	cytosol	16.97	4.32

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	EnsemblPlantsGene:Bra032136	EnsemblPlants:Bra032136.1	EnsemblPlants:Bra032136.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
UniProt:M4ETK4	PFAM:PF00515	PFAM:PF07719	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904
PANTHER:PTHR22904:SF356	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1
InterPro:TPR_2	InterPro:TPR_repeat	UniParc:UPI00025447C7	SEG:seg	:	:

Description

AT4G30480 (E=1e-089) | tetratricopeptide repeat (TPR)-containing protein

Coordinates

chrA04:+:10676967..10678253

Molecular Weight (calculated)

30724.4 Da

IEP (calculated)

4.369

GRAVY (calculated)

-0.904

Length

277 amino acids

Sequence
(BLAST)

001: MVLIESESDD EISVTEVPNP SASSSSPPKT TDAKIVGGDD SDGFETASER GVSDYEEDEE EGDRKQDAGE NQEPQPSDSP EKKEDQVEAV TDVKSNQKEK
101: ALEDANEAKK EGNKLFGDGL YEDALSKYEL ALQFAQEFPE SLDLRSICHS NRAICYLKLG KYAEAIKEST KAIELNPSYT KALVRRAEAH EKLEHFEDAL
201: TDLKKILELD PSNGQARKSI RRLEPLAAEK QEKMKEEAIA KLKEMGNSIL GKFGMSVDNF KAVKDPNTGS YSFSFQN

Best Arabidopsis Sequence Match ( AT4G30480.2 )
(BLAST)

001: MVLIESSESE DEILIKNEPK PASSSSPQPT ETKQVDGDDS DGFETASERE ISDEEGEEDG TKNDAVTSQE EPQHSEKKEE QIELMSEGEA IVDDGSNKEK
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN

Arabidopsis Description

TPR1AT4G30480 protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.