CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011197.1-P	Field mustard	cytosol	84.48	59.76
CDX68662	Canola	endoplasmic reticulum, mitochondrion	86.21	49.02
CDY28190	Canola	extracellular	84.48	48.04
KRH23391	Soybean	cytosol	81.03	26.26
TraesCS5A01G336700.1	Wheat	cytosol	84.48	21.4
TraesCS5D01G341400.1	Wheat	cytosol	82.76	20.96
TraesCS5B01G335700.1	Wheat	cytosol	82.76	20.96
GSMUA_Achr2P02050_001	Banana	cytosol	81.03	20.61
Os10t0486900-01	Rice	cytosol	82.76	20.34
Zm00001d034423_P001	Maize	cytosol	82.76	19.35
KRG99844	Soybean	cytosol	86.21	18.66
KXG33951	Sorghum	cytosol	81.03	18.58
Zm00001d012121_P002	Maize	cytosol	81.03	18.43
Solyc07g006180.2.1	Tomato	cytosol	81.03	18.01
AT4G30480.2	Thale cress	cytosol	84.48	17.69
CDX72245	Canola	cytosol	79.31	17.49
Bra032136.1-P	Field mustard	cytosol	82.76	17.33
CDY39682	Canola	cytosol	82.76	17.33
CDY65185	Canola	cytosol	81.03	16.97
PGSC0003DMT400029173	Potato	cytosol	81.03	16.04
KRH46794	Soybean	cytosol	62.07	13.04
VIT_11s0037g01020.t01	Wine grape	cytosol	37.93	9.02
KRH62368	Soybean	cytosol	25.86	2.29
KRH26223	Soybean	nucleus	25.86	2.22
KRH55099	Soybean	nucleus	25.86	2.21
KRH21985	Soybean	cytosol	25.86	2.17
KRH53085	Soybean	cytosol	25.86	2.15
KRH27330	Soybean	cytosol	25.86	2.15
KRH16702	Soybean	nucleus	24.14	2.02
KRH18895	Soybean	cytosol	24.14	1.99
KRH22291	Soybean	plastid	15.52	1.54
KRH27037	Soybean	nucleus	17.24	1.48
KRH43206	Soybean	cytosol, plastid	1.72	0.18
KRH59356	Soybean	plastid	0.0	0.0
KRH31282	Soybean	plastid	0.0	0.0
KRG97591	Soybean	plastid	0.0	0.0
KRH15375	Soybean	cytosol	0.0	0.0
KRH08675	Soybean	cytosol, mitochondrion, plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02009114	EnsemblPlants:KRH09945	EnsemblPlantsGene:GLYMA_15G020100	ProteinID:KRH09945	ProteinID:KRH09945.1	SEG:seg
UniParc:UPI0006EDF7B6	UniProt:A0A0R0G3W4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:1557290..1557644

Molecular Weight (calculated)

6567.0 Da

IEP (calculated)

10.046

GRAVY (calculated)

-0.516

Length

58 amino acids

Sequence
(BLAST)

1: IQRLEPLAAE KREKMKEEMI AKLKEMGNSV LGRFGMSVDN FKSVKDPNTG SFSVSFRC

Best Arabidopsis Sequence Match ( AT4G30480.2 )
(BLAST)

001: MVLIESSESE DEILIKNEPK PASSSSPQPT ETKQVDGDDS DGFETASERE ISDEEGEEDG TKNDAVTSQE EPQHSEKKEE QIELMSEGEA IVDDGSNKEK
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN

Arabidopsis Description

TPR1AT4G30480 protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.