CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18895	Soybean	cytosol	88.9	87.77
KRH62368	Soybean	cytosol	66.14	70.18
KRH53085	Soybean	cytosol	69.6	69.2
KRH15375	Soybean	cytosol	23.92	66.4
KRH08675	Soybean	cytosol, mitochondrion, plastid	29.97	61.9
VIT_18s0001g05380.t01	Wine grape	plastid	53.89	52.9
Os02t0753500-01	Rice	cytosol	19.6	46.58
HORVU4Hr1G024490.1	Barley	cytosol	20.61	44.69
KRH59356	Soybean	plastid	27.38	44.29
PGSC0003DMT400022057	Potato	plastid	27.09	43.02
CDX79246	Canola	cytosol	31.7	42.97
Bra003657.1-P	Field mustard	cytosol	31.56	42.77
AT1G78120.1	Thale cress	cytosol	32.56	42.64
Bra015628.1-P	Field mustard	cytosol	31.99	42.21
CDX68030	Canola	cytosol	30.84	42.04
CDX87474	Canola	cytosol	31.84	42.02
KRH43206	Soybean	cytosol, plastid	33.14	41.97
CDX88420	Canola	cytosol	31.7	41.83
Solyc04g073940.2.1	Tomato	cytosol	32.42	41.44
PGSC0003DMT400045666	Potato	cytosol	32.42	41.28
GSMUA_Achr3P24690_001	Banana	cytosol	39.77	40.65
KRH31282	Soybean	plastid	33.57	40.03
KRG97591	Soybean	plastid	31.41	39.78
GSMUA_Achr11P...	Banana	plastid	33.14	39.32
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	29.54	35.04
KRH26223	Soybean	nucleus	34.01	34.91
KRH55099	Soybean	nucleus	34.01	34.81
KRH22291	Soybean	plastid	29.25	34.76
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	28.39	34.38
KXG30730	Sorghum	cytosol, plastid	29.11	34.24
Zm00001d018088_P001	Maize	cytosol	28.67	33.73
KRH21985	Soybean	cytosol	33.57	33.67
KRH27330	Soybean	cytosol	33.57	33.38
TraesCS6A01G301400.1	Wheat	mitochondrion	27.52	32.15
HORVU6Hr1G074660.5	Barley	plastid	28.39	31.57
KRH27037	Soybean	nucleus	29.68	30.52
KRH23391	Soybean	cytosol	6.34	24.58
KRG99844	Soybean	cytosol	9.37	24.25
KRH09945	Soybean	cytosol, endoplasmic reticulum	2.02	24.14
KRH46794	Soybean	cytosol	8.07	20.29

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100782846	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02008989	ncoils:Coil
EnsemblPlantsGene:GLYMA_14G171800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	UniProt:I1MAS5	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR013766	InterPro:IPR019734	EnsemblPlants:KRH16702	ProteinID:KRH16702	ProteinID:KRH16702.1
PFAM:PF00085	PFAM:PF13181	PFAM:PF13414	PFAM:PF13431	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000233AE48	SEG:seg

Description

hypothetical protein

Coordinates

chr14:-:42567223..42570927

Molecular Weight (calculated)

77213.3 Da

IEP (calculated)

9.980

GRAVY (calculated)

-0.540

Length

694 amino acids

Sequence
(BLAST)

001: MEMKAKNNKK VGSELGCGLM GRILHLKSHK MRKASVHSLP FKNAQSDDDV KSEESKVSRK RSTGTEPPHK PSGVEQKPAR KSASIHQQPC TNRNNQHQRH
101: SDVAARSSTS SSSSTSISTK VVQQNKDKSH ERKPQGQPTG NSLVLARIST SNENNENNKS QLKLTGNLLV NNTPRRKSVE YMPKSAELNS VPSSYTNASK
201: GLMGNILNRN SDGNKVAQFL SPRMKKVDPE VSKSMGNDAY KQGRFEEALA LYDRAIALDS NKAIYHCNKS AALIGLGRLQ EAIVECEESI KLDPSYVRAH
301: NRLATIYFRL GEAEKALNCN QITPYVDSIL TFQAQALQNH LKKCIEARKV NAWSDILKET QSAISLGSDS APQVYALQIE ALLKLLRYQE AYTIYNKMPK
401: FSIDWCTKIF GPACSAYLLM IGSMIYLASG RFEEAVTAAQ QAVKVDPGNR ELNAMVKKAR AATSARMSGN LLFKASKFIE ACAVYNEGLE HDPHNSVLLC
501: NRAACRSKLG QNEKAIEDCN AALMVQPSYS KAKLRRANCN AKLERWEAAI QDYEMLLRER PGDEEVARAL FEAQLQLKML RGEDIKDLKF GSNLVSISSN
601: DRFRHYVTSP GMAVALFTNK ATHKKVLLVL EQISKRFPSV NFLKVEIEDH PYLAKSESVS SIPAFKIYKN GSSVKEISGN NHELLERSVK LYSS

Best Arabidopsis Sequence Match ( AT1G78120.1 )
(BLAST)

001: MAKSKKISTG QIFGCESLLG CIFQSWSPRR RKPSLPEKDH RAKDNLSSKS STTVTNPKIL PRKSTDTSSQ PKKSDSQKPQ QKPKPDENHP RKSSESARKS
101: SDSARKSISS GSSRTESKRF SLNGVMGNII VKPQPAVKTD VTQTKSRWEG KPVNHRLDPE TLKKMGNEEY CRGRFGQALV FYERAISADP KTPTYWSNKS
201: AALISLGRLL EASDACEEAL RLNPTYERAH QRLASLQLRL GEVEKALCHY NEAGKYTETK HIEQVEDVVK CLRRCDEARR SKEWNVALKE TLFAISYGAD
301: SSPRVYALQT EALLHLQRHE EAYSVYQKGT KRFDIDSFIK IFGLSLTSYL LMVGAQVYIA VGRFEDAVTA SRQAARLDPS SEEVNAVARK ARAVASARLS
401: GNLLFNASKF EGASVVYTEG LENDPYNALL LCNRAASRFK LDLFEKAIED CTLALSLQPS YRKARRRRAD SYAKLEKWQH AIQDYELLMM ETPEDEETRR
501: ALTEVNVRFK KQTGGDVRFK GVGSELVVAN

Arabidopsis Description

TPR12TPR12 [Source:UniProtKB/TrEMBL;Acc:A0A178W863]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.