CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	89.32	90.09
Zm00001d018088_P001	Maize	cytosol	82.88	82.88
Os02t0753500-01	Rice	cytosol	40.51	81.85
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	72.37	74.52
HORVU6Hr1G074660.5	Barley	plastid	71.86	67.95
TraesCS6A01G301400.1	Wheat	mitochondrion	67.29	66.83
CDY08814	Canola	cytosol, plastid	36.61	51.43
GSMUA_Achr11P...	Banana	plastid	50.51	50.94
CDX78366	Canola	cytosol	37.12	49.1
Bra006046.1-P	Field mustard	cytosol	37.12	49.1
CDX81156	Canola	cytosol	36.78	48.65
KRH59356	Soybean	plastid	32.88	45.22
KRH43206	Soybean	cytosol, plastid	40.51	43.61
KRG97591	Soybean	plastid	39.49	42.52
AT5G65160.1	Thale cress	cytosol	42.71	42.5
PGSC0003DMT400022057	Potato	plastid	31.36	42.33
Bra024360.1-P	Field mustard	mitochondrion	42.03	42.32
CDY68462	Canola	cytosol	42.03	42.11
KRH31282	Soybean	plastid	41.36	41.92
AT5G10090.1	Thale cress	cytosol	42.2	41.92
Solyc04g055000.2.1	Tomato	cytosol	41.69	41.91
CDX85779	Canola	cytosol	40.34	41.39
CDY40077	Canola	cytosol	40.17	41.22
KRH08675	Soybean	cytosol, mitochondrion, plastid	23.39	41.07
PGSC0003DMT400053133	Potato	cytosol, plastid	41.69	41.07
KRH15375	Soybean	cytosol	17.12	40.4
Bra009058.1-P	Field mustard	cytosol, mitochondrion	38.14	40.18
CDX69861	Canola	cytosol, mitochondrion	38.14	40.18
CDY21634	Canola	cytosol, mitochondrion	37.63	39.64
VIT_00s0304g00060.t01	Wine grape	plastid	46.95	38.85
Bra015628.1-P	Field mustard	cytosol	34.41	38.59
CDX87474	Canola	cytosol	34.41	38.59
AT1G78120.1	Thale cress	cytosol	34.41	38.3
CDX88420	Canola	cytosol	34.07	38.21
Bra003657.1-P	Field mustard	cytosol	33.05	38.09
CDX68030	Canola	cytosol	32.71	37.92
CDX79246	Canola	cytosol	32.37	37.3
PGSC0003DMT400045666	Potato	cytosol	33.39	36.15
Solyc04g073940.2.1	Tomato	cytosol	33.05	35.91
VIT_18s0001g05380.t01	Wine grape	plastid	41.19	34.37
KRH62368	Soybean	cytosol	35.25	31.8
KRH18895	Soybean	cytosol	35.25	29.59
KRH53085	Soybean	cytosol	34.92	29.51
KRH16702	Soybean	nucleus	34.24	29.11
EES01073	Sorghum	cytosol	32.37	28.05
OQU78515	Sorghum	cytosol	32.2	27.14
EES02247	Sorghum	plastid	31.02	26.75
Bra028602.1-P	Field mustard	cytosol	40.17	21.76
KXG33951	Sorghum	cytosol	9.32	21.74

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A194YSC7	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	EnsemblPlants:KXG30730	ProteinID:KXG30730	ProteinID:KXG30730.1
PFAM:PF00515	PFAM:PF13432	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF360
SMART:SM00028	EnsemblPlantsGene:SORBI_3004G232500	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1
InterPro:TPR_repeat	UniParc:UPI0007F2917D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:58145409..58149930

Molecular Weight (calculated)

63446.3 Da

IEP (calculated)

9.815

GRAVY (calculated)

-0.466

Length

590 amino acids

Sequence
(BLAST)

001: MVAMTEPRDP PPPTGCAMFG IYSGMFRRRR SASMTSLHRI NGASSPAEAE AAAPANPAHH RKPGVLHDSS SLVRRPNAMP VPAPAQNGAV SRAAPPAAND
101: RSRPATKVAN GGVGGPRPAV EPAAEYTGMA AELDKMILDH QRVKGTTQLV RATSGNMMLH RNLGNLNAGG GAPARNSVER GAKAANERKA PNGYAFSGMG
201: NIVKEPRPAA GGSELCRALS HRTDPEKLKE MGNEEYRQGH YTEAVALYDQ AIMMDARRPA YWSNKAAALA ALGRLIEAVG DCKEAVRIDP AYDRAHHRLG
301: GLYLRLGEPD KAIYHLKQSC NESAGADVAR AQSVKSRIAK SSDARRLKNW ITVLQEAQAA VSDGADCAPQ VMALQAEALL RLQRHDDADS LLSSAAAPRF
401: GVDESTKFFG TFGHAYFLIV RAQVDMAAGR FEDAVATAQT AFQLDPSNRE VTVVQRRAKA AAAARLRGND LFKAAKFVEA CAAYGEGLDR EPSNAVLLCN
501: RAACHAKLGR HEKAVEDCSA ALAVRPSYSK ARLRRADCNV KLERWEASLR DYQVLIQELP ENEDVKKSLS EVEAKLKSQR NGGAAARSQH

Best Arabidopsis Sequence Match ( AT5G65160.1 )
(BLAST)

001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS

Arabidopsis Description

TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.