Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011352_P001 | Maize | cytosol | 93.69 | 93.69 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 82.97 | 82.12 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 82.82 | 81.98 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 82.82 | 81.98 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 82.09 | 81.25 |
| OQU78515 | Sorghum | cytosol | 73.42 | 71.43 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 58.15 | 61.02 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 60.65 | 60.29 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 22.61 | 58.33 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 41.56 | 56.26 |
| EES02247 | Sorghum | plastid | 55.8 | 55.56 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 55.07 | 54.11 |
| KRH21985 | Soybean | cytosol | 54.92 | 54.05 |
| KRH26223 | Soybean | nucleus | 53.45 | 53.85 |
| KRH55099 | Soybean | nucleus | 53.6 | 53.83 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 56.24 | 53.79 |
| KRH27330 | Soybean | cytosol | 54.33 | 53.01 |
| KRH22291 | Soybean | plastid | 44.64 | 52.05 |
| PGSC0003DMT400032362 | Potato | cytosol | 53.3 | 51.86 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 54.04 | 51.83 |
| CDY25865 | Canola | cytosol | 50.07 | 51.82 |
| Bra038116.1-P | Field mustard | cytosol | 50.07 | 51.82 |
| CDY25722 | Canola | cytosol, plastid | 50.51 | 51.57 |
| Solyc07g062580.2.1 | Tomato | cytosol | 53.01 | 51.5 |
| CDY02514 | Canola | cytosol, plastid | 50.51 | 51.34 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 50.51 | 51.34 |
| CDY45930 | Canola | cytosol | 49.49 | 51.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.97 | 50.75 |
| Bra000267.1-P | Field mustard | cytosol | 48.31 | 48.96 |
| CDY61202 | Canola | cytosol | 48.16 | 48.88 |
| PGSC0003DMT400054803 | Potato | cytosol | 21.0 | 48.64 |
| CDY55390 | Canola | cytosol | 47.72 | 48.58 |
| CDY51514 | Canola | cytosol | 47.58 | 48.43 |
| AT1G53300.1 | Thale cress | cytosol | 49.63 | 48.35 |
| AT3G58620.1 | Thale cress | cytosol | 48.16 | 48.09 |
| Bra007405.1-P | Field mustard | cytosol | 47.43 | 47.99 |
| Bra004709.1-P | Field mustard | cytosol | 46.11 | 47.79 |
| CDY42827 | Canola | cytosol | 46.84 | 47.54 |
| CDY49237 | Canola | cytosol | 46.55 | 47.53 |
| CDX71941 | Canola | cytosol | 46.99 | 47.48 |
| AT2G42580.1 | Thale cress | cytosol | 47.58 | 46.89 |
| PGSC0003DMT400054902 | Potato | cytosol | 19.97 | 45.48 |
| KRH27037 | Soybean | nucleus | 44.35 | 44.74 |
| CDY34224 | Canola | cytosol | 4.41 | 43.48 |
| PGSC0003DMT400054911 | Potato | cytosol | 32.75 | 42.8 |
| Solyc10g007240.1.1 | Tomato | cytosol | 37.3 | 42.76 |
| PGSC0003DMT400054904 | Potato | cytosol | 37.89 | 42.72 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 37.74 | 41.79 |
| Solyc10g007230.1.1 | Tomato | cytosol | 36.27 | 41.44 |
| AT3G14950.1 | Thale cress | cytosol | 44.05 | 41.1 |
| Bra023795.1-P | Field mustard | cytosol | 5.29 | 40.91 |
| Solyc10g007420.2.1 | Tomato | cytosol | 25.4 | 40.71 |
| Solyc10g007220.1.1 | Tomato | cytosol | 30.1 | 40.59 |
| Bra027292.1-P | Field mustard | cytosol | 42.73 | 39.65 |
| CDX97619 | Canola | cytosol | 41.85 | 39.31 |
| CDX98517 | Canola | cytosol | 41.7 | 39.23 |
| PGSC0003DMT400054909 | Potato | cytosol | 23.49 | 38.84 |
| Solyc10g007250.1.1 | Tomato | cytosol | 15.71 | 38.35 |
| CDY32327 | Canola | cytosol | 40.68 | 38.0 |
| CDY20095 | Canola | nucleus | 40.53 | 37.91 |
| Bra021583.1-P | Field mustard | nucleus | 41.26 | 37.17 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 20.56 | 37.04 |
| PGSC0003DMT400091014 | Potato | nucleus | 32.45 | 36.41 |
| CDY34222 | Canola | cytosol | 16.45 | 36.36 |
| CDY40820 | Canola | mitochondrion | 14.83 | 35.94 |
| Bra023793.1-P | Field mustard | cytosol | 20.26 | 33.5 |
| CDY34223 | Canola | cytosol | 15.57 | 32.52 |
| KXG30730 | Sorghum | cytosol, plastid | 28.05 | 32.37 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 15.42 | 32.21 |
| KXG33951 | Sorghum | cytosol | 9.4 | 25.3 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | EntrezGene:8084826 | UniProt:C5XR15 | EnsemblPlants:EES01073 |
| ProteinID:EES01073 | ProteinID:EES01073.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 | PFAM:PF00085 | PFAM:PF00515 | PFAM:PF14559 |
| PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF395 | SMART:SM00028 | EnsemblPlantsGene:SORBI_3003G220500 |
| SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0001A84A84 | RefSeq:XP_002455953.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:55581986..55586549
Molecular Weight (calculated)
72779.5 Da
IEP (calculated)
9.037
GRAVY (calculated)
-0.296
Length
681 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEADRIRHR TAALALHDDE VRDKPDAKAN VFADLGSPVS PLRARASVAT SSSSSSGSAK SPAPSNAGMA GGRSHSGELV GECNPPRLMA HRRSGSGQLI
101: FSGSSSSRGS GGGDRGSTAS SPMLNALPTG NICPSGRVPA TAGAPPPPRS RPDVLGSGTG HYGHGSIMRG AGMAPARSSI DSSSFLGHSS RSPVSFPASS
201: GSLQEVTRLG NEWYKKGKYG EALRHYERAV ALCPESAACR GNRAAALIGL GRLADALREC EEAVRLDPVS GRAHSRVAGV CLRLGVIDKA RRHFTQAGHL
301: QQSDPAEWQK LQEVEMHLGR CTDARKIGDW KSTLREADAA IAAGADSSQL LLALRSEALL RLHKLEEAES TLGSMLKLDG ALPSSLTAAK LSGMLAESYV
401: HIVRAQVDMA LGRFDTAVAA AEKARDLDPG NAEIGMVLNN VRLVAKAREQ GNDLFKAAKF SDASMAYGEG LKYDPSNSVL HCNRAACWSK LEKWEKAVDD
501: CNEALRIQPN YTKALLRRAA SYAKLERWVD CVRDYEVLRK ELPSDKEVAE ALFHAQIALK ATRGEDVSNM KFGGEVEIVS NVEQLRAAIS SPGVSVVYFM
601: SAMNQQCTQI TPSVNTLCTE CPSVNFLKVN VDSSPMVAKA ENVRIVPTFK IYKGGVKVKE MICPSLHVLR YSVRHYSVSS S
101: FSGSSSSRGS GGGDRGSTAS SPMLNALPTG NICPSGRVPA TAGAPPPPRS RPDVLGSGTG HYGHGSIMRG AGMAPARSSI DSSSFLGHSS RSPVSFPASS
201: GSLQEVTRLG NEWYKKGKYG EALRHYERAV ALCPESAACR GNRAAALIGL GRLADALREC EEAVRLDPVS GRAHSRVAGV CLRLGVIDKA RRHFTQAGHL
301: QQSDPAEWQK LQEVEMHLGR CTDARKIGDW KSTLREADAA IAAGADSSQL LLALRSEALL RLHKLEEAES TLGSMLKLDG ALPSSLTAAK LSGMLAESYV
401: HIVRAQVDMA LGRFDTAVAA AEKARDLDPG NAEIGMVLNN VRLVAKAREQ GNDLFKAAKF SDASMAYGEG LKYDPSNSVL HCNRAACWSK LEKWEKAVDD
501: CNEALRIQPN YTKALLRRAA SYAKLERWVD CVRDYEVLRK ELPSDKEVAE ALFHAQIALK ATRGEDVSNM KFGGEVEIVS NVEQLRAAIS SPGVSVVYFM
601: SAMNQQCTQI TPSVNTLCTE CPSVNFLKVN VDSSPMVAKA ENVRIVPTFK IYKGGVKVKE MICPSLHVLR YSVRHYSVSS S
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.