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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
  • plastid 1
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01073
EES02247
OQU78515

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES14146 Sorghum plasma membrane 84.05 83.37
Zm00001d044304_P002 Maize plasma membrane, vacuole 91.21 83.05
Os04t0337000-01 Rice mitochondrion 50.51 76.95
TraesCS2D01G273200.1 Wheat extracellular, plasma membrane, vacuole 74.64 74.8
TraesCS2B01G291900.1 Wheat extracellular, plasma membrane, vacuole 74.64 74.8
TraesCS2A01G275000.1 Wheat extracellular, plasma membrane, vacuole 74.64 74.8
GSMUA_Achr6P27900_001 Banana golgi, vacuole 66.05 66.74
HORVU2Hr1G066860.8 Barley vacuole 69.53 66.15
OQU84933 Sorghum extracellular, vacuole 65.64 65.51
GSMUA_Achr3P17250_001 Banana plasma membrane, vacuole 63.39 63.92
KRG92565 Soybean cytosol 33.33 56.6
KRH34227 Soybean plasma membrane 54.4 56.0
VIT_04s0023g00730.t01 Wine grape plasma membrane, vacuole 54.19 55.21
PGSC0003DMT400027299 Potato endoplasmic reticulum, golgi, vacuole 48.26 54.25
Bra032452.1-P Field mustard extracellular, plasma membrane 53.17 53.83
CDY06183 Canola plasma membrane, vacuole 53.37 53.7
KRH45218 Soybean plasma membrane, vacuole 53.58 53.69
AT1G05840.1 Thale cress plasma membrane 53.17 53.61
CDY10006 Canola extracellular, plasma membrane, vacuole 52.76 53.42
Solyc04g056590.2.1 Tomato golgi, plasma membrane, vacuole 52.76 53.42
KRH01533 Soybean mitochondrion, plasma membrane, vacuole 53.37 53.27
Os04t0334951-01 Rice extracellular 47.03 53.12
KRH00937 Soybean plasma membrane 52.15 53.01
VIT_05s0062g01370.t01 Wine grape plasma membrane, vacuole 54.19 52.79
PGSC0003DMT400060025 Potato endoplasmic reticulum, extracellular, vacuole 50.51 51.78
Bra035522.1-P Field mustard vacuole 45.19 51.52
KRH40286 Soybean golgi, plasma membrane, vacuole 52.15 51.41
PGSC0003DMT400034018 Potato golgi, plasma membrane, vacuole 49.69 50.73
Solyc05g055800.2.1 Tomato extracellular, vacuole 49.28 50.52
PGSC0003DMT400055639 Potato endoplasmic reticulum, plasma membrane, vacuole 49.49 50.42
Solyc09g098340.2.1 Tomato extracellular 49.28 49.9
CDY41753 Canola golgi, plasma membrane, vacuole 49.08 49.79
Solyc05g053900.2.1 Tomato golgi, vacuole 48.67 49.79
CDY68869 Canola extracellular, vacuole 44.38 49.77
Bra040597.1-P Field mustard vacuole 49.08 49.08
CDY37650 Canola extracellular, golgi 48.26 48.86
Os04t0336600-00 Rice extracellular 48.06 48.76
Os04t0334700-01 Rice extracellular 48.06 48.76
CDY51094 Canola extracellular, vacuole 46.42 48.71
CDY51538 Canola vacuole 48.67 48.67
CDY28705 Canola vacuole 48.67 48.57
AT3G02740.1 Thale cress vacuole 48.47 48.57
PGSC0003DMT400013994 Potato vacuole 47.24 48.53
CDY63001 Canola endoplasmic reticulum, plasma membrane, vacuole 47.85 48.45
AT5G36260.1 Thale cress extracellular, plasma membrane, vacuole 47.65 48.34
Bra035359.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 47.65 48.24
Solyc03g058400.2.1 Tomato vacuole 46.83 47.91
CDY55968 Canola plasma membrane 46.22 47.88
CDY12353 Canola plasma membrane 46.22 47.88
Bra040466.1-P Field mustard plasma membrane 46.01 47.67
CDY53740 Canola vacuole 39.06 47.16
CDY38557 Canola cytosol, plastid 25.97 46.69
Bra039497.1-P Field mustard extracellular, vacuole 46.83 46.64
AT1G65240.1 Thale cress golgi, plasma membrane, vacuole 44.79 46.11
Bra021415.1-P Field mustard vacuole 34.56 42.46
KXG33497 Sorghum vacuole 35.79 34.59
EES09417 Sorghum plasma membrane, vacuole 21.68 25.54
EES08111 Sorghum vacuole 20.86 25.0
KXG23105 Sorghum plasma membrane, vacuole 23.11 24.67
EES09418 Sorghum endoplasmic reticulum, golgi, vacuole 20.04 24.02
KXG30744 Sorghum extracellular, vacuole 24.74 23.31
EER99278 Sorghum extracellular, plasma membrane, vacuole 24.54 22.94
KXG25917 Sorghum vacuole 23.93 22.63
EER99637 Sorghum plasma membrane 29.24 22.63
EER88970 Sorghum vacuole 23.72 21.44
EES05585 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 22.7 19.93
KXG19766 Sorghum cytosol, plastid, vacuole 20.65 19.27
EER89124 Sorghum extracellular, vacuole 22.09 18.78
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:8078223InterPro:Aspartic_peptidase_A1UniProt:C5XPE3EnsemblPlants:EES03170
ProteinID:EES03170ProteinID:EES03170.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016787GO:GO:0019538
GO:GO:0030163InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543
PRINTS:PR00792PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF404InterPro:Pepsin-like_plantInterPro:Peptidase_aspartic_dom_sf
EnsemblPlantsGene:SORBI_3003G199200SUPFAM:SSF50630unigene:Sbi.17100SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_N
TMHMM:TMhelixUniParc:UPI0001A84E2ERefSeq:XP_002458050.1SEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:52624214..52629208
Molecular Weight (calculated)
52281.6 Da
IEP (calculated)
6.179
GRAVY (calculated)
0.046
Length
489 amino acids
Sequence
(BLAST)
001: MAPPPPRLAA LILLAALLLL LLAAGAAATG VFQVRRKFPA GVGGGASANI SALRVHDGRR HGRLLAAADL PLGGLGLPTD TGLYFTEIKL GTPPKRYYVQ
101: VDTGSDILWV NCISCEKCPR KSGLGLDLTF YDPKASSSGS TVSCDQGFCA ATYGGKLPGC TANVPCEYSV MYGDGSSTTG FFVTDALQFD QVTGDGQTQP
201: GNATVTFGCG AQQGGDLGSS NQALDGILGF GQANTSMLSQ LAAAGKVKKI FAHCLDTIKG GGIFAIGNVV QPKVKTTPLV ADMPHYNVNL KSIDVGGTTL
301: QLPAHVFETG ERKGTIIDSG TTLTYLPELV FKEVMAAIFN KHQDIVFHNV QDFMCFQYPG SVDDGFPTIT FHFEDDLALH VYPHEYFFPN GNDMYCVGFQ
401: NGALQSKDGK DIVLMGDLVL SNKLVIYDLE NQVIGWTDYN CSSSIKIEDD KTGTPYTVNS HDISSGWKYH WHKSLVLLLV TMVCGNLIR
Best Arabidopsis Sequence Match ( AT1G05840.1 )
(BLAST)
001: MTLSIVSFPI CGRFTLIWFL TALVSVSCNP GVFNVKYRYP RLQGSLTALK EHDDRRQLTI LAGIDLPLGG TGRPDIPGLY YAKIGIGTPA KSYYVQVDTG
101: SDIMWVNCIQ CKQCPRRSTL GIELTLYNID ESDSGKLVSC DDDFCYQISG GPLSGCKANM SCPYLEIYGD GSSTAGYFVK DVVQYDSVAG DLKTQTANGS
201: VIFGCGARQS GDLDSSNEEA LDGILGFGKA NSSMISQLAS SGRVKKIFAH CLDGRNGGGI FAIGRVVQPK VNMTPLVPNQ PHYNVNMTAV QVGQEFLTIP
301: ADLFQPGDRK GAIIDSGTTL AYLPEIIYEP LVKKITSQEP ALKVHIVDKD YKCFQYSGRV DEGFPNVTFH FENSVFLRVY PHDYLFPHEG MWCIGWQNSA
401: MQSRDRRNMT LLGDLVLSNK LVLYDLENQL IGWTEYNCSS SIKVKDEGTG TVHLVGSHFI SSALPLDTSM CLLFSLLLLM TLFLL
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:F4IAD5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.