CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63001	Canola	endoplasmic reticulum, plasma membrane, vacuole	97.93	97.93
CDY41753	Canola	golgi, plasma membrane, vacuole	88.61	88.8
AT5G36260.1	Thale cress	extracellular, plasma membrane, vacuole	84.89	85.06
CDY51094	Canola	extracellular, vacuole	80.95	83.91
CDY68869	Canola	extracellular, vacuole	75.57	83.72
CDY38557	Canola	cytosol, plastid	46.38	82.35
CDY55968	Canola	plasma membrane	68.32	69.92
CDY12353	Canola	plasma membrane	67.91	69.49
KRG92565	Soybean	cytosol	33.13	55.56
PGSC0003DMT400027299	Potato	endoplasmic reticulum, golgi, vacuole	48.45	53.79
KRH34227	Soybean	plasma membrane	51.76	52.63
Solyc04g056590.2.1	Tomato	golgi, plasma membrane, vacuole	52.38	52.38
VIT_04s0023g00730.t01	Wine grape	plasma membrane, vacuole	51.97	52.29
KRH00937	Soybean	plasma membrane	51.35	51.56
KRH40286	Soybean	golgi, plasma membrane, vacuole	51.76	50.4
CDY51538	Canola	vacuole	50.52	49.9
Os04t0337000-01	Rice	mitochondrion	33.13	49.84
Solyc03g058400.2.1	Tomato	vacuole	49.28	49.79
PGSC0003DMT400013994	Potato	vacuole	49.07	49.79
CDY28705	Canola	vacuole	50.31	49.59
Solyc05g055800.2.1	Tomato	extracellular, vacuole	48.65	49.27
GSMUA_Achr6P27900_001	Banana	golgi, vacuole	49.28	49.17
PGSC0003DMT400060025	Potato	endoplasmic reticulum, extracellular, vacuole	48.45	49.06
EES03170	Sorghum	plasma membrane, vacuole	48.86	48.26
GSMUA_Achr3P17250_001	Banana	plasma membrane, vacuole	48.24	48.04
Os02t0473200-01	Rice	plasma membrane	48.65	47.57
EES14146	Sorghum	plasma membrane	48.45	47.46
TraesCS2D01G273200.1	Wheat	extracellular, plasma membrane, vacuole	47.62	47.13
TraesCS7A01G395300.1	Wheat	vacuole	47.62	46.94
TraesCS7D01G390900.1	Wheat	vacuole	47.62	46.94
CDY10006	Canola	extracellular, plasma membrane, vacuole	46.79	46.79
TraesCS2A01G275000.1	Wheat	extracellular, plasma membrane, vacuole	47.2	46.72
CDY06183	Canola	plasma membrane, vacuole	47.0	46.71
TraesCS7B01G297200.2	Wheat	plasma membrane, vacuole	47.83	46.57
TraesCS2B01G291900.1	Wheat	extracellular, plasma membrane, vacuole	47.0	46.52
OQU84933	Sorghum	extracellular, vacuole	47.0	46.33
CDY53740	Canola	vacuole	38.51	45.93
Zm00001d052720_P002	Maize	plasma membrane	47.83	45.47
Zm00001d050521_P001	Maize	vacuole	45.55	43.74
Zm00001d016477_P004	Maize	vacuole	46.58	43.44
Zm00001d044304_P002	Maize	plasma membrane, vacuole	47.62	42.83
Zm00001d016476_P001	Maize	vacuole	44.31	42.63
Os04t0334951-01	Rice	extracellular	38.1	42.49
HORVU2Hr1G066860.8	Barley	vacuole	44.93	42.22
Os04t0336600-00	Rice	extracellular	39.13	39.21
Os04t0334700-01	Rice	extracellular	39.13	39.21
CDY22694	Canola	endoplasmic reticulum, extracellular, vacuole	29.19	35.34
CDY26962	Canola	vacuole	35.2	34.62
CDX92331	Canola	extracellular, plasma membrane, vacuole	35.2	34.62
CDY09172	Canola	extracellular, golgi	28.36	33.91
CDY31159	Canola	plasma membrane	34.78	33.67
CDY32825	Canola	endoplasmic reticulum, plasma membrane	34.78	33.67
CDY06305	Canola	endoplasmic reticulum, plasma membrane, vacuole	34.37	33.54
CDY22695	Canola	mitochondrion, plastid	20.5	33.11
CDX75024	Canola	vacuole	33.54	32.14
CDY33177	Canola	extracellular, plasma membrane, vacuole	33.33	31.94
CDY71029	Canola	cytosol, plastid, vacuole	10.56	30.72
CDY14973	Canola	vacuole	22.15	26.1
CDY12535	Canola	vacuole	20.91	25.7
CDY10133	Canola	vacuole	22.15	25.06
CDX75359	Canola	golgi, vacuole	21.12	23.78
CDX68982	Canola	golgi, vacuole	20.7	23.26
CDY02252	Canola	golgi, plasma membrane, vacuole	14.7	22.76
CDX69862	Canola	plasma membrane, vacuole	23.6	22.05
CDY41786	Canola	plasma membrane, vacuole	20.29	21.68
CDY21629	Canola	plastid, vacuole	23.19	21.62
CDX87518	Canola	plasma membrane, vacuole	20.29	21.26
CDY18730	Canola	extracellular, plasma membrane, vacuole	17.6	21.2
CDX88370	Canola	plasma membrane, vacuole	20.08	21.09
CDY21633	Canola	cytosol	17.6	20.83
CDX90651	Canola	plasma membrane	22.98	20.79
CDX73727	Canola	vacuole	21.12	20.69
CDX73728	Canola	vacuole	22.98	20.63
CDX77999	Canola	vacuole	22.77	20.52
CDY29013	Canola	plasma membrane	22.57	20.41
CDY60079	Canola	cytosol	22.77	20.41
CDY07819	Canola	vacuole	21.53	20.35
CDY24371	Canola	extracellular, plasma membrane, vacuole	21.53	20.31
CDX78000	Canola	vacuole	20.91	20.04
CDX75536	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.95	20.04
CDX69179	Canola	plasma membrane	21.74	19.77
CDY29199	Canola	vacuole	20.91	19.77
CDX68564	Canola	plasma membrane, vacuole	25.26	19.37
CDY22367	Canola	plasma membrane	25.88	19.26
CDX83107	Canola	plasma membrane	25.05	19.24
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	22.36	19.18
CDY30609	Canola	plasma membrane	24.64	19.04
CDX71501	Canola	plasma membrane	25.47	18.98
CDY57356	Canola	plasma membrane	24.22	18.51
CDY20815	Canola	plasma membrane, plastid, vacuole	21.95	17.58

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078HH38	UniProt:A0A078HH38	InterPro:Aspartic_peptidase_A1	EnsemblPlants:CDY37650
ProteinID:CDY37650	ProteinID:CDY37650.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00064529001	InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF519
InterPro:Pepsin-like_plant	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix
UniParc:UPI0004EB93A3	:	:	:	:	:

Description

BnaC04g29920DBnaC04g29920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HH38]

Coordinates

chrLK032405:-:207990..210545

Molecular Weight (calculated)

52073.0 Da

IEP (calculated)

4.976

GRAVY (calculated)

0.072

Length

483 amino acids

Sequence
(BLAST)

001: MVVAMDPSLS LRIIATVLMM VIQFAWGSFV FNVTHKFAGK DKQLSELKSH DTFRHARMLA NVDLPLGGDS RADSIGLYFT KIQLGSPAKY YHVQVDTGSD
101: ILWVNCAPCS KCPVKTDLGI PLSLYDSKAS STSKKVWCDD DFCSLISQSD TCEPEKKACS YHVVYGDGST SDGDFVKDNI TLDQVTGNLR TAPLAQEVVF
201: GCGSNQSGQL GQTDSAVDGI MGFGQANTSI LSQLAAAGSV KRVFAHCLDN VNGGGIFAVG EVESPVVKTT PLVPNQVHYN VILKGIDVDG DPVDLPPSIA
301: SFGGNGGTII DSGTTLAYLP ENLYNSLLKK ITTRQPVKLH MVQETFACFS FTSNTDKAFP VVNLHFEDSL KLTVHPHDYL FSLREDMYCF GWQSGGMTTQ
401: DGSDVILLGD LVLSNKLVVY DLDNEVIGWV DHNCSSSIKV KDGSGAAYSL KADNLVQSAS SVINGTLVTL LSILISVFYT FTL

Best Arabidopsis Sequence Match ( AT5G36260.1 )
(BLAST)

001: MVTTMDPSRI SRIVAVVFVL VIQVVSGNFV FNVTHKFAGK EKQLSELKSH DSFRHARMLA NIDLPLGGDS RADSIGLYFT KIKLGSPPKE YYVQVDTGSD
101: ILWVNCAPCP KCPVKTDLGI PLSLYDSKTS STSKNVGCED DFCSFIMQSE TCGAKKPCSY HVVYGDGSTS DGDFIKDNIT LEQVTGNLRT APLAQEVVFG
201: CGKNQSGQLG QTDSAVDGIM GFGQSNTSII SQLAAGGSTK RIFSHCLDNM NGGGIFAVGE VESPVVKTTP IVPNQVHYNV ILKGMDVDGD PIDLPPSLAS
301: TNGDGGTIID SGTTLAYLPQ NLYNSLIEKI TAKQQVKLHM VQETFACFSF TSNTDKAFPV VNLHFEDSLK LSVYPHDYLF SLREDMYCFG WQSGGMTTQD
401: GADVILLGDL VLSNKLVVYD LENEVIGWAD HNCSSSIKVK DGSGAAYQLG AENLISAASS VMNGTLVTLL SILIWVFHSF TS

Arabidopsis Description

At5g36260 [Source:UniProtKB/TrEMBL;Acc:Q4V3D2]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.