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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX89333
CDX94330

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G17760.1 CDX89333 AT4G26455.1 21798944
AT2G17760.1 CDX94330 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002086.1-P Field mustard extracellular, plasma membrane, vacuole 97.85 99.6
AT2G17760.1 Thale cress golgi, plasma membrane, vacuole 89.06 88.89
CDY29199 Canola vacuole 86.72 86.89
CDY07819 Canola vacuole 84.38 84.54
CDY20815 Canola plasma membrane, plastid, vacuole 97.46 82.75
VIT_00s0510g00050.t01 Wine grape plasma membrane, vacuole 33.01 55.23
KRH28845 Soybean vacuole 53.52 53.94
KRH76603 Soybean vacuole 52.73 53.15
CDY02252 Canola golgi, plasma membrane, vacuole 32.03 52.56
PGSC0003DMT400010765 Potato cytosol 18.36 50.54
PGSC0003DMT400009406 Potato plasma membrane, vacuole 52.54 49.91
Solyc02g083460.2.1 Tomato extracellular 52.15 49.54
KRH07991 Soybean nucleus 49.61 49.22
GSMUA_Achr4P05070_001 Banana plasma membrane, vacuole 42.19 48.21
Solyc03g033360.1.1 Tomato plastid 35.55 46.79
CDY29013 Canola plasma membrane 48.24 46.25
CDX90651 Canola plasma membrane 48.24 46.25
PGSC0003DMT400058018 Potato vacuole 49.22 46.07
TraesCS2D01G065800.1 Wheat vacuole 45.51 45.69
Zm00001d022600_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 45.51 45.69
CDX69179 Canola plasma membrane 47.27 45.57
CDX75536 Canola endoplasmic reticulum, plasma membrane, vacuole 47.07 45.56
TraesCS2B01G079700.1 Wheat vacuole 45.51 45.33
GSMUA_Achr2P03530_001 Banana plasma membrane 46.09 45.3
GSMUA_Achr1P07410_001 Banana cytosol 12.3 45.0
TraesCS2A01G067500.1 Wheat vacuole 44.92 44.83
TraesCS5B01G334700.1 Wheat endoplasmic reticulum, extracellular, vacuole 45.12 44.77
GSMUA_Achr1P07390_001 Banana extracellular, vacuole 44.92 44.66
KXG25917 Sorghum vacuole 44.92 44.49
TraesCS5D01G340300.1 Wheat extracellular, plasma membrane, vacuole 45.12 44.42
CDX73727 Canola vacuole 42.77 44.42
GSMUA_AchrUn_... Banana plasma membrane, vacuole 38.87 44.32
TraesCS5A01G335500.1 Wheat extracellular, plasma membrane, vacuole 44.92 44.23
EER99278 Sorghum extracellular, plasma membrane, vacuole 44.92 43.98
Os09t0542100-01 Rice plasma membrane 41.6 43.47
CDX78000 Canola vacuole 42.77 43.45
Zm00001d004132_P001 Maize extracellular 43.95 43.44
KRH69733 Soybean nucleus 50.98 43.36
CDX77999 Canola vacuole 45.31 43.28
GSMUA_Achr1P07400_001 Banana cytosol, plasma membrane, plastid 13.48 43.12
Os04t0228000-01 Rice extracellular, vacuole 44.14 42.64
CDX73728 Canola vacuole 44.73 42.57
GSMUA_AchrUn_... Banana vacuole 42.58 42.33
GSMUA_Achr7P03880_001 Banana extracellular 36.13 42.05
TraesCS7D01G524300.1 Wheat plastid 42.38 41.41
HORVU5Hr1G084490.1 Barley vacuole 44.73 41.34
TraesCS7A01G537200.1 Wheat plasma membrane 42.97 41.12
EER88970 Sorghum vacuole 42.77 40.48
HORVU7Hr1G118020.3 Barley extracellular, plasma membrane, vacuole 42.38 40.41
Zm00001d014804_P001 Maize extracellular 41.99 39.59
Os06t0717900-02 Rice extracellular 42.19 39.2
EER89124 Sorghum extracellular, vacuole 43.75 38.96
Zm00001d036037_P001 Maize vacuole 43.36 38.54
CDY21633 Canola cytosol 26.56 33.33
CDX69862 Canola plasma membrane, vacuole 33.2 32.88
CDY21629 Canola plastid, vacuole 33.01 32.63
CDY71029 Canola cytosol, plastid, vacuole 8.4 25.9
CDX92331 Canola extracellular, plasma membrane, vacuole 23.63 24.64
CDY68869 Canola extracellular, vacuole 20.9 24.54
CDY26962 Canola vacuole 23.44 24.44
CDY22695 Canola mitochondrion, plastid 14.06 24.08
CDY22694 Canola endoplasmic reticulum, extracellular, vacuole 18.75 24.06
CDX68982 Canola golgi, vacuole 20.12 23.95
CDY12535 Canola vacuole 18.36 23.92
CDX75359 Canola golgi, vacuole 19.92 23.78
CDY14973 Canola vacuole 18.95 23.66
CDY51094 Canola extracellular, vacuole 21.48 23.61
CDY55968 Canola plasma membrane 21.68 23.52
CDY09172 Canola extracellular, golgi 18.55 23.51
CDY41786 Canola plasma membrane, vacuole 20.7 23.45
CDY12353 Canola plasma membrane 21.48 23.31
CDY06305 Canola endoplasmic reticulum, plasma membrane, vacuole 22.46 23.23
CDX88370 Canola plasma membrane, vacuole 20.7 23.04
CDY10006 Canola extracellular, plasma membrane, vacuole 21.68 22.98
CDY18730 Canola extracellular, plasma membrane, vacuole 17.97 22.94
CDY06183 Canola plasma membrane, vacuole 21.68 22.84
CDX87518 Canola plasma membrane, vacuole 20.51 22.78
CDY10133 Canola vacuole 18.95 22.72
CDY41753 Canola golgi, plasma membrane, vacuole 21.09 22.41
CDY28705 Canola vacuole 21.29 22.24
CDY31159 Canola plasma membrane 21.48 22.04
CDY32825 Canola endoplasmic reticulum, plasma membrane 21.48 22.04
CDY51538 Canola vacuole 20.9 21.88
CDX75024 Canola vacuole 21.48 21.83
CDY33177 Canola extracellular, plasma membrane, vacuole 21.48 21.83
CDY63001 Canola endoplasmic reticulum, plasma membrane, vacuole 20.51 21.74
CDY37650 Canola extracellular, golgi 20.31 21.53
CDY53740 Canola vacuole 16.41 20.74
CDY38557 Canola cytosol, plastid 10.74 20.22
CDY60079 Canola cytosol 19.73 18.74
CDY04326 Canola cytosol, endoplasmic reticulum, vacuole 19.92 18.12
CDX83107 Canola plasma membrane 21.68 17.65
CDX68564 Canola plasma membrane, vacuole 21.68 17.62
CDY30609 Canola plasma membrane 21.29 17.44
CDY57356 Canola plasma membrane 21.48 17.41
CDY22367 Canola plasma membrane 21.09 16.64
CDX71501 Canola plasma membrane 19.73 15.59
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10GO:A0A078GG58UniProt:A0A078GG58InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_AS
EnsemblPlants:CDY24371ProteinID:CDY24371ProteinID:CDY24371.1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00026589001InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543
PRINTS:PR00792ScanProsite:PS00141PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF232InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630InterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0004EF3744SEG:seg
Description
BnaA07g02960DBnaA07g02960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GG58]
Coordinates
chrLK032157:+:497952..500794
Molecular Weight (calculated)
55717.7 Da
IEP (calculated)
5.658
GRAVY (calculated)
-0.081
Length
512 amino acids
Sequence
(BLAST)
001: MVLYSSCRIM LLGLIIIVIS SWVLGKAQAF GEFGFEFHHR FSDRVVGALP GDGLPSRGSS QYYRVMAHRD RVIRGRRLAT QDQSLVSFAD GNETVRVDAL
101: GFLHYANVTV GTPSNWFLVA LDTGSDLFWL PCDCTNCVRE LKGPGASSLE LNIYSPNASS TSAKVPCNSS LCTRGDRCAS PNSNCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKNSKAIP ARVTLGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDRGSVDQ RETPLNIRQP
301: HPTYNITVTQ ISVGGNTGDL EFDAVFDSGT SFTYLTAEAY TLITESFNSL AMDKRYQTDS ELPFEYCYAL SPNKDSFQYP AVNLTMKGGG SYPVYHPLVV
401: IPMKDTDVYC LGVMKIEDIS IIGQNFMTGY RVVFDREKLV LGWKESDCYT GETSARALPS NRSSSSARPP ASSFEPEATN IPSQRPSTSS SSYYSLSLTV
501: SFFYFFSVLA FL
Best Arabidopsis Sequence Match ( AT2G17760.1 )
(BLAST)
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.