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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30609 Canola plasma membrane 94.78 95.84
CDX83107 Canola plasma membrane 86.39 86.8
CDX68564 Canola plasma membrane, vacuole 85.92 86.19
AT3G50050.1 Thale cress plasma membrane, vacuole 84.34 84.34
GSMUA_Achr4P07210_001 Banana cytosol, plastid, vacuole 51.27 57.86
KRH04490 Soybean vacuole 57.44 57.26
GSMUA_Achr3P18830_001 Banana cytosol 51.74 57.17
EER99637 Sorghum plasma membrane 55.38 55.38
TraesCS2A01G195800.1 Wheat plasma membrane 54.91 54.91
Zm00001d022010_P004 Maize plasma membrane, plastid 54.59 54.59
TraesCS2D01G192000.1 Wheat plasma membrane, plastid, vacuole 54.43 54.43
TraesCS2B01G210700.2 Wheat plasma membrane 54.43 54.43
Os07t0592200-02 Rice plasma membrane 54.27 54.36
HORVU2Hr1G034720.3 Barley vacuole 54.27 54.36
KRH77066 Soybean endoplasmic reticulum, plasma membrane 55.38 54.26
KRH28412 Soybean plasma membrane 55.54 54.17
KRH58031 Soybean plastid 56.65 52.26
VIT_07s0129g00600.t01 Wine grape extracellular 51.42 51.34
GSMUA_Achr4P14240_001 Banana cytosol, peroxisome, plastid 45.25 50.89
PGSC0003DMT400073638 Potato plasma membrane 52.69 50.84
Solyc01g098710.2.1 Tomato plasma membrane, vacuole 52.22 50.69
CDY22367 Canola plasma membrane 51.58 50.23
CDX71501 Canola plasma membrane 51.27 50.0
Zm00001d006751_P001 Maize vacuole 52.37 47.76
CDY71029 Canola cytosol, plastid, vacuole 8.23 31.33
CDY22695 Canola mitochondrion, plastid 14.08 29.77
CDY22694 Canola endoplasmic reticulum, extracellular, vacuole 18.04 28.57
CDY51538 Canola vacuole 21.2 27.4
CDY09172 Canola extracellular, golgi 17.41 27.23
CDY28705 Canola vacuole 20.89 26.94
CDY06305 Canola endoplasmic reticulum, plasma membrane, vacuole 21.04 26.87
CDY12353 Canola plasma membrane 19.78 26.48
CDY38557 Canola cytosol, plastid 11.39 26.47
CDY55968 Canola plasma membrane 19.46 26.06
CDY31159 Canola plasma membrane 20.57 26.05
CDY32825 Canola endoplasmic reticulum, plasma membrane 20.57 26.05
CDY53740 Canola vacuole 16.46 25.68
CDY68869 Canola extracellular, vacuole 17.56 25.46
CDY14973 Canola vacuole 16.46 25.37
CDY26962 Canola vacuole 19.46 25.05
CDY51094 Canola extracellular, vacuole 18.35 24.89
CDX92331 Canola extracellular, plasma membrane, vacuole 19.3 24.85
CDY10006 Canola extracellular, plasma membrane, vacuole 18.99 24.84
CDY06183 Canola plasma membrane, vacuole 18.99 24.69
CDY12535 Canola vacuole 15.35 24.68
CDX68982 Canola golgi, vacuole 16.77 24.65
CDY10133 Canola vacuole 16.61 24.59
CDY63001 Canola endoplasmic reticulum, plasma membrane, vacuole 18.67 24.43
CDY37650 Canola extracellular, golgi 18.51 24.22
CDY41753 Canola golgi, plasma membrane, vacuole 18.35 24.07
CDX75359 Canola golgi, vacuole 16.3 24.01
CDY33177 Canola extracellular, plasma membrane, vacuole 18.99 23.81
CDX75024 Canola vacuole 18.83 23.61
CDX88370 Canola plasma membrane, vacuole 16.3 22.39
CDY41786 Canola plasma membrane, vacuole 15.82 22.12
CDX87518 Canola plasma membrane, vacuole 15.98 21.91
CDY24371 Canola extracellular, plasma membrane, vacuole 17.41 21.48
CDY21633 Canola cytosol 13.77 21.32
CDY07819 Canola vacuole 17.09 21.14
CDY29199 Canola vacuole 17.09 21.14
CDX69862 Canola plasma membrane, vacuole 16.77 20.5
CDY60079 Canola cytosol 17.41 20.41
CDX73727 Canola vacuole 15.51 19.88
CDY04326 Canola cytosol, endoplasmic reticulum, vacuole 17.56 19.72
CDY18730 Canola extracellular, plasma membrane, vacuole 12.5 19.7
CDY21629 Canola plastid, vacuole 15.82 19.3
CDX78000 Canola vacuole 15.35 19.25
CDX77999 Canola vacuole 16.14 19.03
CDX73728 Canola vacuole 16.14 18.96
CDY20815 Canola plasma membrane, plastid, vacuole 17.56 18.41
CDX75536 Canola endoplasmic reticulum, plasma membrane, vacuole 15.19 18.15
CDX69179 Canola plasma membrane 15.19 18.08
CDX90651 Canola plasma membrane 14.87 17.6
CDY29013 Canola plasma membrane 14.56 17.23
CDY02252 Canola golgi, plasma membrane, vacuole 8.07 16.35
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10GO:A0A078J3Z6UniProt:A0A078J3Z6InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_AS
EnsemblPlants:CDY57356ProteinID:CDY57356ProteinID:CDY57356.1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0005575GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00020888001InterPro:IPR021109InterPro:IPR033121
InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792ScanProsite:PS00141PFscan:PS51767
PANTHER:PTHR13683PANTHER:PTHR13683:SF419InterPro:Pepsin-like_plantInterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTM
InterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0004EE8387SEG:seg:
Description
BnaC08g48640DBnaC08g48640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3Z6]
Coordinates
chrLK033568:+:20658..23433
Molecular Weight (calculated)
69628.0 Da
IEP (calculated)
5.155
GRAVY (calculated)
-0.153
Length
632 amino acids
Sequence
(BLAST)
001: MALASIGAMF SLLIYLSLPC SNAAAENILH QSPPPADGSR RPMVFPLFLS QPNSSRSMSL LHRKLHSKSL PHSRMRLYDD ILLNGYYTTR LWIGTPPQMF
101: ALIVDSGSTV TYVPCSDCEQ CGKHQDPKFQ PEMSTTYQPV KCNMDCHCDD DKEQCLYERE YAEHSSSKGV LGEDLISFGN ESELTPHRAV FGCENVETGD
201: LYSQRADGII GLGQGDLSLV DQLVDKGLIS NSFALCYGGM DLGGGSMVLG GFSYPSDMMF TDSDPDRSPY YNIDLTGIRV AGKDLLLDSR VFDGEHGVVL
301: DSGTTYAYLP DAAFSAFEEA LMREASPLKK IDGPDPNFKD TCFHVAPSND ASGLSTIFPS VEMVFKSGQS WLLSPENYLF RHSKVHGAYC LGVFPNGKDH
401: TTLLGGIVVR NTLVVYDREN SKVGFLRTNC SELSDRLHID DSAPPPATLP SNDSNPTLNT SSSLPGGEIQ IGQINLDIQL TVNSSYLKPR MEELSKVLSK
501: ELDVKSSQVY ISNLTSKGNN SLIRVVVVPT EPSSLFSNVT ETSIVSRFTN HQIKLPDIFG NYELVSYTLE PSRKRARWVM KNTIVVMAIL IVAVVVGLIA
601: YGVWLMWKRK QASNPYIHVD EAIVAEQELL PL
Best Arabidopsis Sequence Match ( AT3G50050.1 )
(BLAST)
001: MALPSISSIG ATFSLLIYLS LPYSITAGEN NLLHQSPTAR SRRPMVFPLF LSQPNSSSRS ISIPHRKLHK SDSKSLPHSR MRLYDDLLIN GYYTTRLWIG
101: TPPQMFALIV DSGSTVTYVP CSDCEQCGKH QDPKFQPEMS STYQPVKCNM DCNCDDDREQ CVYEREYAEH SSSKGVLGED LISFGNESQL TPQRAVFGCE
201: TVETGDLYSQ RADGIIGLGQ GDLSLVDQLV DKGLISNSFG LCYGGMDVGG GSMILGGFDY PSDMVFTDSD PDRSPYYNID LTGIRVAGKQ LSLHSRVFDG
301: EHGAVLDSGT TYAYLPDAAF AAFEEAVMRE VSTLKQIDGP DPNFKDTCFQ VAASNYVSEL SKIFPSVEMV FKSGQSWLLS PENYMFRHSK VHGAYCLGVF
401: PNGKDHTTLL GGIVVRNTLV VYDRENSKVG FWRTNCSELS DRLHIDGAPP PATLPSNDSN PSHNSSSNLS GVTQVGQINL DIQLTVNSSY LKPRIEDLSK
501: IFSKELDVKS SQVSLSNLTS KGNESLVRMV VLPPEPSTWF SNVTATNIVS RFTNHQIKLP EIFGNYQLVN YKLEPPRKRT NNNIVVIAIG IIAVIVGLSA
601: YGAWLIWKRK QTSIPYKPVD EAIVAEQELQ PI
Arabidopsis Description
At3g50050 [Source:UniProtKB/TrEMBL;Acc:Q9SN13]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.