Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029989.1-P | Field mustard | plasma membrane | 97.14 | 97.3 |
| CDX83107 | Canola | plasma membrane | 97.14 | 97.3 |
| CDY30609 | Canola | plasma membrane | 85.24 | 85.92 |
| CDY57356 | Canola | plasma membrane | 86.19 | 85.92 |
| AT3G50050.1 | Thale cress | plasma membrane, vacuole | 85.87 | 85.6 |
| GSMUA_Achr4P07210_001 | Banana | cytosol, plastid, vacuole | 52.7 | 59.29 |
| GSMUA_Achr3P18830_001 | Banana | cytosol | 53.02 | 58.39 |
| KRH04490 | Soybean | vacuole | 57.78 | 57.41 |
| TraesCS2A01G195800.1 | Wheat | plasma membrane | 56.03 | 55.85 |
| EER99637 | Sorghum | plasma membrane | 55.87 | 55.7 |
| TraesCS2D01G192000.1 | Wheat | plasma membrane, plastid, vacuole | 55.56 | 55.38 |
| TraesCS2B01G210700.2 | Wheat | plasma membrane | 55.56 | 55.38 |
| HORVU2Hr1G034720.3 | Barley | vacuole | 55.24 | 55.15 |
| Os07t0592200-02 | Rice | plasma membrane | 55.08 | 54.99 |
| KRH28412 | Soybean | plasma membrane | 56.35 | 54.78 |
| Zm00001d022010_P004 | Maize | plasma membrane, plastid | 54.76 | 54.59 |
| KRH77066 | Soybean | endoplasmic reticulum, plasma membrane | 55.56 | 54.26 |
| KRH58031 | Soybean | plastid | 57.46 | 52.85 |
| VIT_07s0129g00600.t01 | Wine grape | extracellular | 52.22 | 51.97 |
| GSMUA_Achr4P14240_001 | Banana | cytosol, peroxisome, plastid | 46.19 | 51.78 |
| Solyc01g098710.2.1 | Tomato | plasma membrane, vacuole | 53.33 | 51.61 |
| PGSC0003DMT400073638 | Potato | plasma membrane | 53.49 | 51.45 |
| CDX71501 | Canola | plasma membrane | 52.54 | 51.08 |
| CDY22367 | Canola | plasma membrane | 52.22 | 50.69 |
| Zm00001d006751_P001 | Maize | vacuole | 52.38 | 47.62 |
| CDY71029 | Canola | cytosol, plastid, vacuole | 8.25 | 31.33 |
| CDY22695 | Canola | mitochondrion, plastid | 14.13 | 29.77 |
| CDY22694 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.41 | 29.07 |
| CDY09172 | Canola | extracellular, golgi | 17.62 | 27.48 |
| CDY51538 | Canola | vacuole | 21.11 | 27.2 |
| CDY06305 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.27 | 27.07 |
| CDY38557 | Canola | cytosol, plastid | 11.59 | 26.84 |
| CDY28705 | Canola | vacuole | 20.79 | 26.73 |
| CDY32825 | Canola | endoplasmic reticulum, plasma membrane | 21.11 | 26.65 |
| CDY31159 | Canola | plasma membrane | 21.11 | 26.65 |
| CDY12353 | Canola | plasma membrane | 19.84 | 26.48 |
| CDY68869 | Canola | extracellular, vacuole | 18.1 | 26.15 |
| CDY55968 | Canola | plasma membrane | 19.52 | 26.06 |
| CDY51094 | Canola | extracellular, vacuole | 19.05 | 25.75 |
| CDY14973 | Canola | vacuole | 16.67 | 25.61 |
| CDY63001 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 19.52 | 25.47 |
| CDX92331 | Canola | extracellular, plasma membrane, vacuole | 19.84 | 25.46 |
| CDY26962 | Canola | vacuole | 19.84 | 25.46 |
| CDY53740 | Canola | vacuole | 16.35 | 25.43 |
| CDY41753 | Canola | golgi, plasma membrane, vacuole | 19.37 | 25.31 |
| CDY37650 | Canola | extracellular, golgi | 19.37 | 25.26 |
| CDY10133 | Canola | vacuole | 16.98 | 25.06 |
| CDX68982 | Canola | golgi, vacuole | 16.98 | 24.88 |
| CDY06183 | Canola | plasma membrane, vacuole | 19.05 | 24.69 |
| CDY12535 | Canola | vacuole | 15.4 | 24.68 |
| CDY10006 | Canola | extracellular, plasma membrane, vacuole | 18.73 | 24.43 |
| CDX75359 | Canola | golgi, vacuole | 16.51 | 24.24 |
| CDY33177 | Canola | extracellular, plasma membrane, vacuole | 19.05 | 23.81 |
| CDX75024 | Canola | vacuole | 19.05 | 23.81 |
| CDX88370 | Canola | plasma membrane, vacuole | 16.83 | 23.04 |
| CDY41786 | Canola | plasma membrane, vacuole | 16.03 | 22.35 |
| CDX87518 | Canola | plasma membrane, vacuole | 16.35 | 22.34 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 17.62 | 21.68 |
| CDY07819 | Canola | vacuole | 17.3 | 21.33 |
| CDY29199 | Canola | vacuole | 17.3 | 21.33 |
| CDY21633 | Canola | cytosol | 13.17 | 20.34 |
| CDY18730 | Canola | extracellular, plasma membrane, vacuole | 12.86 | 20.2 |
| CDX69862 | Canola | plasma membrane, vacuole | 16.35 | 19.92 |
| CDY60079 | Canola | cytosol | 16.83 | 19.67 |
| CDX73727 | Canola | vacuole | 15.24 | 19.47 |
| CDX77999 | Canola | vacuole | 16.51 | 19.4 |
| CDY04326 | Canola | cytosol, endoplasmic reticulum, vacuole | 17.14 | 19.18 |
| CDX73728 | Canola | vacuole | 16.35 | 19.14 |
| CDX78000 | Canola | vacuole | 15.24 | 19.05 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 17.78 | 18.57 |
| CDY21629 | Canola | plastid, vacuole | 15.24 | 18.53 |
| CDX90651 | Canola | plasma membrane | 15.24 | 17.98 |
| CDX75536 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.08 | 17.96 |
| CDX69179 | Canola | plasma membrane | 15.08 | 17.89 |
| CDY29013 | Canola | plasma membrane | 14.92 | 17.6 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 8.1 | 16.35 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | GO:A0A078BXN1 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | EnsemblPlants:CDX68564 |
| ProteinID:CDX68564 | ProteinID:CDX68564.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00126142001 | InterPro:IPR021109 |
| InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PRINTS:PR00792 | ScanProsite:PS00141 |
| PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF419 | InterPro:Pepsin-like_plant | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 |
| SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI0004EBBADB | SEG:seg |
Description
BnaC01g26420D
Coordinates
chrLK031788:-:4185095..4188177
Molecular Weight (calculated)
69281.5 Da
IEP (calculated)
5.343
GRAVY (calculated)
-0.160
Length
630 amino acids
Sequence
(BLAST)
(BLAST)
001: MALASIGATV SLLIIYQSLP IYTHAAGENI VLQSPPMVFP LFLSQPNSTS SSRSVSVHHR KLHKSLPHSR MRLYDDLLLN GYYTTRLWIG TPPQMFALIV
101: DSGSTVTYVP CSDCEQCGKH QDPKFQPEMS STYQPVKCNM DCNCDDDKEQ CVYEREYAEH SSSKGVLGED LISFGNESQL TPQRAVFGCE TLETGDLYSQ
201: RADGIIGLGQ GDLSLVDQLV DKGLISNSFA LCYGGMDLGG GSMVLGGFAY PSDMTFTDSD PDRSPYYNID LTGIRVAGKQ LSLSSGVFDG EHGAVLDSGT
301: TYAYLPDAAF AAFEEAVMRE VSPLKQIDGP DPNFKDTCFH VAPSNDASGL SKIFPSVEMV FKSGQSWLLS PENYLFRHSK VHGAYCLGVF PNGKDHTTLL
401: GGIVVRNTLV VYDRENSKVG FWRTNCSELS DRLPIDGALP PPPPAKLPLN ESNPSLNTSS NLPGEKTQIG QINLDIQLTV NSSYLKPRLE ELSKVFSKEL
501: DIKPTQVYLS NLTSNGNNSL IRVVVIPTES SSLFSNVTAT SIVSRFSNHQ IKLPDIFGDY QLLTYKLEPP RKGTRWQVKN IIVVIAIVMV SVVVSLLAYG
601: VWLMWKRKQT SNLYKPVDDA IVAEQELQPL
101: DSGSTVTYVP CSDCEQCGKH QDPKFQPEMS STYQPVKCNM DCNCDDDKEQ CVYEREYAEH SSSKGVLGED LISFGNESQL TPQRAVFGCE TLETGDLYSQ
201: RADGIIGLGQ GDLSLVDQLV DKGLISNSFA LCYGGMDLGG GSMVLGGFAY PSDMTFTDSD PDRSPYYNID LTGIRVAGKQ LSLSSGVFDG EHGAVLDSGT
301: TYAYLPDAAF AAFEEAVMRE VSPLKQIDGP DPNFKDTCFH VAPSNDASGL SKIFPSVEMV FKSGQSWLLS PENYLFRHSK VHGAYCLGVF PNGKDHTTLL
401: GGIVVRNTLV VYDRENSKVG FWRTNCSELS DRLPIDGALP PPPPAKLPLN ESNPSLNTSS NLPGEKTQIG QINLDIQLTV NSSYLKPRLE ELSKVFSKEL
501: DIKPTQVYLS NLTSNGNNSL IRVVVIPTES SSLFSNVTAT SIVSRFSNHQ IKLPDIFGDY QLLTYKLEPP RKGTRWQVKN IIVVIAIVMV SVVVSLLAYG
601: VWLMWKRKQT SNLYKPVDDA IVAEQELQPL
001: MALPSISSIG ATFSLLIYLS LPYSITAGEN NLLHQSPTAR SRRPMVFPLF LSQPNSSSRS ISIPHRKLHK SDSKSLPHSR MRLYDDLLIN GYYTTRLWIG
101: TPPQMFALIV DSGSTVTYVP CSDCEQCGKH QDPKFQPEMS STYQPVKCNM DCNCDDDREQ CVYEREYAEH SSSKGVLGED LISFGNESQL TPQRAVFGCE
201: TVETGDLYSQ RADGIIGLGQ GDLSLVDQLV DKGLISNSFG LCYGGMDVGG GSMILGGFDY PSDMVFTDSD PDRSPYYNID LTGIRVAGKQ LSLHSRVFDG
301: EHGAVLDSGT TYAYLPDAAF AAFEEAVMRE VSTLKQIDGP DPNFKDTCFQ VAASNYVSEL SKIFPSVEMV FKSGQSWLLS PENYMFRHSK VHGAYCLGVF
401: PNGKDHTTLL GGIVVRNTLV VYDRENSKVG FWRTNCSELS DRLHIDGAPP PATLPSNDSN PSHNSSSNLS GVTQVGQINL DIQLTVNSSY LKPRIEDLSK
501: IFSKELDVKS SQVSLSNLTS KGNESLVRMV VLPPEPSTWF SNVTATNIVS RFTNHQIKLP EIFGNYQLVN YKLEPPRKRT NNNIVVIAIG IIAVIVGLSA
601: YGAWLIWKRK QTSIPYKPVD EAIVAEQELQ PI
101: TPPQMFALIV DSGSTVTYVP CSDCEQCGKH QDPKFQPEMS STYQPVKCNM DCNCDDDREQ CVYEREYAEH SSSKGVLGED LISFGNESQL TPQRAVFGCE
201: TVETGDLYSQ RADGIIGLGQ GDLSLVDQLV DKGLISNSFG LCYGGMDVGG GSMILGGFDY PSDMVFTDSD PDRSPYYNID LTGIRVAGKQ LSLHSRVFDG
301: EHGAVLDSGT TYAYLPDAAF AAFEEAVMRE VSTLKQIDGP DPNFKDTCFQ VAASNYVSEL SKIFPSVEMV FKSGQSWLLS PENYMFRHSK VHGAYCLGVF
401: PNGKDHTTLL GGIVVRNTLV VYDRENSKVG FWRTNCSELS DRLHIDGAPP PATLPSNDSN PSHNSSSNLS GVTQVGQINL DIQLTVNSSY LKPRIEDLSK
501: IFSKELDVKS SQVSLSNLTS KGNESLVRMV VLPPEPSTWF SNVTATNIVS RFTNHQIKLP EIFGNYQLVN YKLEPPRKRT NNNIVVIAIG IIAVIVGLSA
601: YGAWLIWKRK QTSIPYKPVD EAIVAEQELQ PI
Arabidopsis Description
At3g50050 [Source:UniProtKB/TrEMBL;Acc:Q9SN13]
SUBAcon: [plasma membrane,vacuole]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.