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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX89333
CDX94330

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G17760.1 CDX89333 AT4G26455.1 21798944
AT2G17760.1 CDX94330 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024490.1-P Field mustard vacuole 100.0 100.0
CDY07819 Canola vacuole 95.69 95.69
AT2G17760.1 Thale cress golgi, plasma membrane, vacuole 88.45 88.11
CDY24371 Canola extracellular, plasma membrane, vacuole 86.89 86.72
CDY20815 Canola plasma membrane, plastid, vacuole 85.91 72.8
VIT_00s0510g00050.t01 Wine grape plasma membrane, vacuole 33.07 55.23
CDY02252 Canola golgi, plasma membrane, vacuole 32.29 52.88
KRH28845 Soybean vacuole 52.25 52.56
KRH76603 Soybean vacuole 51.86 52.17
KRH07991 Soybean nucleus 50.88 50.39
PGSC0003DMT400009406 Potato plasma membrane, vacuole 52.25 49.54
Solyc02g083460.2.1 Tomato extracellular 52.25 49.54
PGSC0003DMT400010765 Potato cytosol 18.0 49.46
GSMUA_Achr4P05070_001 Banana plasma membrane, vacuole 42.27 48.21
GSMUA_Achr1P07410_001 Banana cytosol 13.11 47.86
CDY29013 Canola plasma membrane 48.92 46.82
CDX90651 Canola plasma membrane 48.73 46.63
Solyc03g033360.1.1 Tomato plastid 35.42 46.53
PGSC0003DMT400058018 Potato vacuole 48.92 45.7
TraesCS2D01G065800.1 Wheat vacuole 45.4 45.49
CDX73727 Canola vacuole 43.64 45.23
GSMUA_Achr2P03530_001 Banana plasma membrane 45.99 45.11
CDX69179 Canola plasma membrane 46.77 45.01
TraesCS5B01G334700.1 Wheat endoplasmic reticulum, extracellular, vacuole 45.4 44.96
CDX75536 Canola endoplasmic reticulum, plasma membrane, vacuole 46.38 44.8
TraesCS2A01G067500.1 Wheat vacuole 44.81 44.64
TraesCS5D01G340300.1 Wheat extracellular, plasma membrane, vacuole 45.4 44.62
TraesCS2B01G079700.1 Wheat vacuole 44.81 44.55
Zm00001d022600_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 44.42 44.51
KXG25917 Sorghum vacuole 45.01 44.49
CDX78000 Canola vacuole 43.84 44.44
TraesCS5A01G335500.1 Wheat extracellular, plasma membrane, vacuole 45.21 44.42
KRH69733 Soybean nucleus 52.05 44.19
GSMUA_Achr1P07400_001 Banana cytosol, plasma membrane, plastid 13.7 43.75
EER99278 Sorghum extracellular, plasma membrane, vacuole 44.42 43.4
Zm00001d004132_P001 Maize extracellular 43.84 43.24
GSMUA_Achr1P07390_001 Banana extracellular, vacuole 43.25 42.91
CDX77999 Canola vacuole 45.01 42.91
Os09t0542100-01 Rice plasma membrane 41.1 42.86
GSMUA_AchrUn_... Banana plasma membrane, vacuole 37.38 42.54
CDX73728 Canola vacuole 44.62 42.38
Os04t0228000-01 Rice extracellular, vacuole 43.84 42.26
HORVU5Hr1G084490.1 Barley vacuole 44.81 41.34
TraesCS7A01G537200.1 Wheat plasma membrane 42.27 40.37
TraesCS7D01G524300.1 Wheat plastid 41.29 40.27
GSMUA_AchrUn_... Banana vacuole 40.51 40.19
GSMUA_Achr7P03880_001 Banana extracellular 34.44 40.0
HORVU7Hr1G118020.3 Barley extracellular, plasma membrane, vacuole 40.9 38.92
Zm00001d014804_P001 Maize extracellular 40.9 38.49
Os06t0717900-02 Rice extracellular 41.49 38.48
EER88970 Sorghum vacuole 40.7 38.45
EER89124 Sorghum extracellular, vacuole 42.27 37.57
Zm00001d036037_P001 Maize vacuole 41.68 36.98
CDY21633 Canola cytosol 26.81 33.58
CDX69862 Canola plasma membrane, vacuole 32.88 32.5
CDY21629 Canola plastid, vacuole 32.49 32.05
CDY22694 Canola endoplasmic reticulum, extracellular, vacuole 19.18 24.56
CDY71029 Canola cytosol, plastid, vacuole 7.83 24.1
CDY12535 Canola vacuole 18.2 23.66
CDY41786 Canola plasma membrane, vacuole 20.74 23.45
CDX92331 Canola extracellular, plasma membrane, vacuole 22.5 23.42
CDY14973 Canola vacuole 18.79 23.41
CDX88370 Canola plasma membrane, vacuole 20.94 23.26
CDX68982 Canola golgi, vacuole 19.57 23.26
CDY26962 Canola vacuole 22.31 23.22
CDY68869 Canola extracellular, vacuole 19.77 23.17
CDX75359 Canola golgi, vacuole 19.37 23.08
CDX87518 Canola plasma membrane, vacuole 20.74 22.99
CDY10133 Canola vacuole 18.98 22.72
CDY18730 Canola extracellular, plasma membrane, vacuole 17.81 22.69
CDY06305 Canola endoplasmic reticulum, plasma membrane, vacuole 21.92 22.63
CDY55968 Canola plasma membrane 20.74 22.46
CDY22695 Canola mitochondrion, plastid 13.11 22.41
CDY09172 Canola extracellular, golgi 17.61 22.28
CDY12353 Canola plasma membrane 20.55 22.25
CDY10006 Canola extracellular, plasma membrane, vacuole 20.94 22.15
CDY51094 Canola extracellular, vacuole 20.16 22.1
CDY28705 Canola vacuole 21.14 22.04
CDY06183 Canola plasma membrane, vacuole 20.94 22.02
CDY51538 Canola vacuole 20.74 21.68
CDX75024 Canola vacuole 21.33 21.63
CDY32825 Canola endoplasmic reticulum, plasma membrane 20.94 21.44
CDY31159 Canola plasma membrane 20.94 21.44
CDY33177 Canola extracellular, plasma membrane, vacuole 21.14 21.43
CDY41753 Canola golgi, plasma membrane, vacuole 20.16 21.37
CDY37650 Canola extracellular, golgi 19.77 20.91
CDY63001 Canola endoplasmic reticulum, plasma membrane, vacuole 19.77 20.91
CDY53740 Canola vacuole 15.26 19.26
CDY38557 Canola cytosol, plastid 9.98 18.75
CDY60079 Canola cytosol 19.57 18.55
CDY04326 Canola cytosol, endoplasmic reticulum, vacuole 19.57 17.76
CDX83107 Canola plasma membrane 21.33 17.33
CDX68564 Canola plasma membrane, vacuole 21.33 17.3
CDY30609 Canola plasma membrane 20.94 17.12
CDY57356 Canola plasma membrane 21.14 17.09
CDY22367 Canola plasma membrane 20.55 16.18
CDX71501 Canola plasma membrane 19.37 15.28
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10GO:A0A078GVL8UniProt:A0A078GVL8InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_AS
EnsemblPlants:CDY29199ProteinID:CDY29199ProteinID:CDY29199.1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00042101001InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543
PRINTS:PR00792ScanProsite:PS00141PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF232InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NUniParc:UPI000253EFA0SEG:seg
Description
BnaA06g25580DBnaA06g25580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVL8]
Coordinates
chrLK032233:+:157844..161000
Molecular Weight (calculated)
55916.9 Da
IEP (calculated)
6.344
GRAVY (calculated)
-0.143
Length
511 amino acids
Sequence
(BLAST)
001: MVSYSSCRIT FAGLILLLVS SWRLDRCEGL GEFGFEFHHR FSDQVLGVLP GDGLPHRDSS KYYRVMAHRD RLIRGRRLAT QDQPLVSFAD GNETVRVNGL
101: GFLHYANVTV GTPSSWFLVA LDTGSDLFWL PCDCTSCVRE LKAPGGSSLE LNIYSPNASS TSSKVPCNSM LCKRGDRCAS PNSNCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNEKNSKAIP ARITLGCGQV QTGVFHDGAA PNGLFGLGLD DISVPSVLAK DGIAANSFSM CFGKDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVAQ ISVGGNTDDL EFDAVFDSGT SFTYLTDAAY ALISESFNSQ AMDKRYQTDS KLPFEYCYAL SPSKDSIEYP AVNLTMKGGS SYHVYHPLVV
401: FPMKDTDVYC LAIMKIEDIS IIGQNFMTGY RIIFDREKLT LGWKESDCYT GETSARTLPS NRSSSLARPP ASSFAPEATN IPSQRPSTSS SSYYSFSLSL
501: SFFYFSILAI F
Best Arabidopsis Sequence Match ( AT2G17760.1 )
(BLAST)
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.