Factsheet for Bra024490.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra026434.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17760.1	Bra026434.1-P	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29199	Canola	vacuole	100.0	100.0
AT2G17760.1	Thale cress	golgi, plasma membrane, vacuole	88.45	88.11
Bra002086.1-P	Field mustard	extracellular, plasma membrane, vacuole	85.13	86.48
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	33.07	55.23
KRH28845	Soybean	vacuole	52.25	52.56
KRH76603	Soybean	vacuole	51.86	52.17
Bra013063.1-P	Field mustard	plasma membrane	29.16	51.38
KRH07991	Soybean	nucleus	50.88	50.39
Solyc02g083460.2.1	Tomato	extracellular	52.25	49.54
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	52.25	49.54
PGSC0003DMT400010765	Potato	cytosol	18.0	49.46
GSMUA_Achr4P05070_001	Banana	plasma membrane, vacuole	42.27	48.21
GSMUA_Achr1P07410_001	Banana	cytosol	13.11	47.86
Solyc03g033360.1.1	Tomato	plastid	35.42	46.53
Bra036814.1-P	Field mustard	vacuole	43.44	45.96
PGSC0003DMT400058018	Potato	vacuole	48.92	45.7
TraesCS2D01G065800.1	Wheat	vacuole	45.4	45.49
GSMUA_Achr2P03530_001	Banana	plasma membrane	45.99	45.11
TraesCS5B01G334700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.4	44.96
TraesCS2A01G067500.1	Wheat	vacuole	44.81	44.64
TraesCS5D01G340300.1	Wheat	extracellular, plasma membrane, vacuole	45.4	44.62
Bra012857.1-P	Field mustard	plasma membrane	39.33	44.57
TraesCS2B01G079700.1	Wheat	vacuole	44.81	44.55
Bra011646.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	46.18	44.53
Zm00001d022600_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	44.42	44.51
KXG25917	Sorghum	vacuole	45.01	44.49
TraesCS5A01G335500.1	Wheat	extracellular, plasma membrane, vacuole	45.21	44.42
KRH69733	Soybean	nucleus	52.05	44.19
GSMUA_Achr1P07400_001	Banana	cytosol, plasma membrane, plastid	13.7	43.75
EER99278	Sorghum	extracellular, plasma membrane, vacuole	44.42	43.4
Zm00001d004132_P001	Maize	extracellular	43.84	43.24
GSMUA_Achr1P07390_001	Banana	extracellular, vacuole	43.25	42.91
Os09t0542100-01	Rice	plasma membrane	41.1	42.86
Bra036815.1-P	Field mustard	vacuole	45.21	42.62
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	37.38	42.54
Os04t0228000-01	Rice	extracellular, vacuole	43.84	42.26
HORVU5Hr1G084490.1	Barley	vacuole	44.81	41.34
TraesCS7A01G537200.1	Wheat	plasma membrane	42.27	40.37
TraesCS7D01G524300.1	Wheat	plastid	41.29	40.27
GSMUA_AchrUn_...	Banana	vacuole	40.51	40.19
GSMUA_Achr7P03880_001	Banana	extracellular	34.44	40.0
HORVU7Hr1G118020.3	Barley	extracellular, plasma membrane, vacuole	40.9	38.92
Zm00001d014804_P001	Maize	extracellular	40.9	38.49
Os06t0717900-02	Rice	extracellular	41.49	38.48
EER88970	Sorghum	vacuole	40.7	38.45
EER89124	Sorghum	extracellular, vacuole	42.27	37.57
Zm00001d036037_P001	Maize	vacuole	41.68	36.98
Bra009059.1-P	Field mustard	plasma membrane, vacuole	32.88	32.5
Bra011446.1-P	Field mustard	mitochondrion, plasma membrane, plastid	19.96	24.34
Bra036941.1-P	Field mustard	vacuole	18.98	23.6
Bra020219.1-P	Field mustard	extracellular	22.5	23.47
Bra002434.1-P	Field mustard	vacuole	22.31	23.22
Bra031617.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	21.92	22.63
Bra035522.1-P	Field mustard	vacuole	18.79	22.38
Bra015669.1-P	Field mustard	plasma membrane, vacuole	19.96	22.32
Bra040466.1-P	Field mustard	plasma membrane	20.55	22.25
Bra032452.1-P	Field mustard	extracellular, plasma membrane	20.94	22.15
Bra040597.1-P	Field mustard	vacuole	21.14	22.09
Bra005254.1-P	Field mustard	vacuole	21.53	21.83
Bra030717.1-P	Field mustard	vacuole	19.77	21.54
Bra035359.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	19.57	20.7
Bra039497.1-P	Field mustard	extracellular, vacuole	19.77	20.57
Bra032272.1-P	Field mustard	cytosol	19.37	18.37
Bra021415.1-P	Field mustard	vacuole	14.29	18.34
Bra029989.1-P	Field mustard	plasma membrane	21.33	17.33
Bra036047.1-P	Field mustard	plastid	20.94	17.12
Bra033660.1-P	Field mustard	plasma membrane	20.35	15.98

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	EnsemblPlantsGene:Bra024490	EnsemblPlants:Bra024490.1
EnsemblPlants:Bra024490.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121
UniProt:M4E6T5	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF232	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM
InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI000253EFA0	SEG:seg	:	:

Description

AT2G17760 (E=9e-254) | aspartyl protease family protein

Coordinates

chrA06:-:16185441..16188264

Molecular Weight (calculated)

55916.9 Da

IEP (calculated)

6.344

GRAVY (calculated)

-0.143

Length

511 amino acids

Sequence
(BLAST)

001: MVSYSSCRIT FAGLILLLVS SWRLDRCEGL GEFGFEFHHR FSDQVLGVLP GDGLPHRDSS KYYRVMAHRD RLIRGRRLAT QDQPLVSFAD GNETVRVNGL
101: GFLHYANVTV GTPSSWFLVA LDTGSDLFWL PCDCTSCVRE LKAPGGSSLE LNIYSPNASS TSSKVPCNSM LCKRGDRCAS PNSNCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNEKNSKAIP ARITLGCGQV QTGVFHDGAA PNGLFGLGLD DISVPSVLAK DGIAANSFSM CFGKDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVAQ ISVGGNTDDL EFDAVFDSGT SFTYLTDAAY ALISESFNSQ AMDKRYQTDS KLPFEYCYAL SPSKDSIEYP AVNLTMKGGS SYHVYHPLVV
401: FPMKDTDVYC LAIMKIEDIS IIGQNFMTGY RIIFDREKLT LGWKESDCYT GETSARTLPS NRSSSLARPP ASSFAPEATN IPSQRPSTSS SSYYSFSLSL
501: SFFYFSILAI F

Best Arabidopsis Sequence Match ( AT2G17760.1 )
(BLAST)

001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL

Arabidopsis Description

APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.