Factsheet for GSMUA_AchrUn_randomP16870_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P04120_001
GSMUA_Achr4P01630_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17760.1	GSMUA_Achr10P...	AT4G26455.1	21798944
AT2G17760.1	GSMUA_Achr3P04120_001	AT4G26455.1	21798944
AT2G17760.1	GSMUA_Achr4P01630_001	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P03880_001	Banana	extracellular	59.69	60.91
GSMUA_Achr4P05070_001	Banana	plasma membrane, vacuole	60.13	60.27
GSMUA_Achr2P03530_001	Banana	plasma membrane	61.69	53.17
GSMUA_Achr1P07400_001	Banana	cytosol, plasma membrane, plastid	18.93	53.12
GSMUA_Achr1P07390_001	Banana	extracellular, vacuole	57.24	49.9
GSMUA_Achr1P07410_001	Banana	cytosol	14.25	45.71
Zm00001d022600_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	51.67	45.49
TraesCS5B01G334700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.45	44.77
EER99278	Sorghum	extracellular, plasma membrane, vacuole	51.67	44.36
TraesCS5A01G335500.1	Wheat	extracellular, plasma membrane, vacuole	51.22	44.23
TraesCS5D01G340300.1	Wheat	extracellular, plasma membrane, vacuole	51.0	44.04
GSMUA_AchrUn_...	Banana	vacuole	49.44	43.11
PGSC0003DMT400010765	Potato	cytosol	17.37	41.94
Zm00001d014804_P001	Maize	extracellular	50.33	41.62
HORVU5Hr1G084490.1	Barley	vacuole	51.0	41.34
EER88970	Sorghum	vacuole	48.55	40.3
TraesCS7D01G524300.1	Wheat	plastid	46.99	40.27
TraesCS7A01G537200.1	Wheat	plasma membrane	47.66	40.0
Bra013063.1-P	Field mustard	plasma membrane	25.84	40.0
HORVU7Hr1G118020.3	Barley	extracellular, plasma membrane, vacuole	47.66	39.85
Os09t0542100-01	Rice	plasma membrane	43.43	39.8
CDY02252	Canola	golgi, plasma membrane, vacuole	27.39	39.42
Bra002086.1-P	Field mustard	extracellular, plasma membrane, vacuole	43.88	39.16
Os06t0717900-02	Rice	extracellular	47.88	39.02
CDY24371	Canola	extracellular, plasma membrane, vacuole	44.32	38.87
KRH28845	Soybean	vacuole	43.88	38.78
Solyc03g033360.1.1	Tomato	plastid	33.41	38.56
KRH76603	Soybean	vacuole	43.43	38.39
AT2G17760.1	Thale cress	golgi, plasma membrane, vacuole	43.65	38.21
CDY07819	Canola	vacuole	42.98	37.77
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	25.61	37.58
Solyc02g083460.2.1	Tomato	extracellular	44.99	37.48
CDY29199	Canola	vacuole	42.54	37.38
Bra024490.1-P	Field mustard	vacuole	42.54	37.38
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	44.54	37.11
KRH07991	Soybean	nucleus	42.54	37.02
CDY29013	Canola	plasma membrane	43.43	36.52
CDX90651	Canola	plasma membrane	43.43	36.52
PGSC0003DMT400058018	Potato	vacuole	44.32	36.38
AT3G51330.1	Thale cress	extracellular, plasma membrane, vacuole	42.76	36.29
Zm00001d036037_P001	Maize	vacuole	46.33	36.11
Bra036814.1-P	Field mustard	vacuole	38.75	36.02
EER89124	Sorghum	extracellular, vacuole	45.66	35.65
CDX73727	Canola	vacuole	38.98	35.5
CDX78000	Canola	vacuole	39.2	34.92
Bra012857.1-P	Field mustard	plasma membrane	34.97	34.81
AT3G51360.9	Thale cress	vacuole	38.31	34.54
Bra036815.1-P	Field mustard	vacuole	40.76	33.76
CDX77999	Canola	vacuole	40.09	33.58
AT3G51350.1	Thale cress	extracellular, plasma membrane, vacuole	39.42	33.52
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	39.64	33.52
CDY20815	Canola	plasma membrane, plastid, vacuole	44.77	33.33
GSMUA_Achr5P22890_001	Banana	endoplasmic reticulum, plasma membrane	38.31	33.14
CDX73728	Canola	vacuole	39.64	33.09
AT3G51340.1	Thale cress	plasma membrane	38.53	32.64
KRH69733	Soybean	nucleus	41.65	31.06
GSMUA_Achr2P17680_001	Banana	vacuole	26.5	23.85
GSMUA_Achr6P29770_001	Banana	extracellular, plasma membrane, vacuole	25.84	23.15
GSMUA_Achr8P15150_001	Banana	extracellular, plasma membrane, vacuole	26.28	23.14
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	21.83	22.63
GSMUA_Achr3P19030_001	Banana	vacuole	20.94	22.49
GSMUA_Achr6P27900_001	Banana	golgi, vacuole	24.05	22.31
GSMUA_Achr3P17250_001	Banana	plasma membrane, vacuole	24.05	22.27
GSMUA_Achr6P17740_001	Banana	extracellular	20.04	19.91
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	21.16	17.43
GSMUA_Achr4P14240_001	Banana	cytosol, peroxisome, plastid	20.94	16.73
GSMUA_Achr4P07210_001	Banana	cytosol, plastid, vacuole	20.49	16.43
GSMUA_Achr3P18830_001	Banana	cytosol	20.27	15.91

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSMUA_AchrUn_randomG16870_001	EnsemblPlants:GSMUA_AchrUn_randomP16870_001	EnsemblPlants:GSMUA_AchrUn_randomT16870_001	InterPro:IPR021109	InterPro:IPR033121	UniProt:M0U9U6
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF232	InterPro:Pepsin-like_plant	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI000296739A	SEG:seg	:	:

Description

Putative Aspartic proteinase-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG16870_001]

Coordinates

chrchrUn_random:-:79232048..79234004

Molecular Weight (calculated)

48621.6 Da

IEP (calculated)

4.720

GRAVY (calculated)

0.026

Length

449 amino acids

Sequence
(BLAST)

001: MASSPVRDGR RLVALRLVLA AAILVEADAV GLELHHRFSI RVREWAEAQA VAGAWWPEKG TAEYYTSLAH HDRALRGRFL AAANYSQLAF AAEGNVTFQI
101: SSLGFLYYAF VELGTPKQEF LVALDTGSHL LWVPCDCLQC APTYDPNAYG VNMTFNIYSP SNSSTSRKLL CSDSMCQTTC TGAGSNCPYG VTYADNSSTS
201: GVLVEDTLYL VAEDTSARVV EAPIVFGCGR NQTGSFLGGG APDGLLGLAM GKIAVPSVLA SRGLIPDSFS MCFGDDGIGR LDFGDKGSKQ QQETPLHRSD
301: LYVIGLTGMA VGNSAMAASF RAFVDSGTSF TYLSEPMYTS LAQTFDSQVP EKRRPPNPNL PFDYCYDLSP SQKSVSFPEI YFTTQGGSRF PASDPLIMIY
401: VQGVPSMYCL AVINSTFGFN IIGENFMAGL RVVFDRERLV LGWENSDCE

Best Arabidopsis Sequence Match ( AT4G35880.1 )
(BLAST)

001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV

Arabidopsis Description

AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.