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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • vacuole 1
  • mitochondrion 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:vacuole
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:endoplasmic reticulum
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G331000.1
TraesCS2B01G351300.1
TraesCS2D01G332000.1
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS7A01G240200.1
TraesCS7B01G135800.1
TraesCS7D01G238200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G17760.1 TraesCS2A01G331000.1 AT4G26455.1 21798944
AT2G17760.1 TraesCS2B01G351300.1 AT4G26455.1 21798944
AT2G17760.1 TraesCS2D01G332000.1 AT4G26455.1 21798944
AT2G17760.1 TraesCS5A01G257000.1 AT4G26455.1 21798944
AT2G17760.1 TraesCS5B01G256500.1 AT4G26455.1 21798944
AT2G17760.1 TraesCS5D01G265600.1 AT4G26455.1 21798944
AT2G17760.1 TraesCS7A01G240200.1 AT4G26455.1 21798944
AT2G17760.1 TraesCS7B01G135800.1 AT4G26455.1 21798944
AT2G17760.1 TraesCS7D01G238200.1 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G537200.1 Wheat plasma membrane 92.37 90.47
HORVU7Hr1G118020.3 Barley extracellular, plasma membrane, vacuole 88.36 86.22
Zm00001d014804_P001 Maize extracellular 62.79 60.59
EER88970 Sorghum vacuole 61.45 59.52
Os06t0717900-02 Rice extracellular 61.83 58.8
GSMUA_AchrUn_... Banana plasma membrane, vacuole 40.27 46.99
PGSC0003DMT400010765 Potato cytosol 15.84 44.62
TraesCS5D01G340300.1 Wheat extracellular, plasma membrane, vacuole 44.08 44.42
GSMUA_Achr7P03880_001 Banana extracellular 37.21 44.32
Bra002086.1-P Field mustard extracellular, plasma membrane, vacuole 41.41 43.14
VIT_00s0510g00050.t01 Wine grape plasma membrane, vacuole 25.19 43.14
CDY24371 Canola extracellular, plasma membrane, vacuole 41.41 42.38
KRH28845 Soybean vacuole 40.27 41.54
Solyc03g033360.1.1 Tomato plastid 30.73 41.39
TraesCS2D01G065800.1 Wheat vacuole 40.27 41.37
KRH76603 Soybean vacuole 40.08 41.34
AT2G17760.1 Thale cress golgi, plasma membrane, vacuole 40.46 41.33
CDY29199 Canola vacuole 40.27 41.29
Bra024490.1-P Field mustard vacuole 40.27 41.29
CDY07819 Canola vacuole 40.08 41.1
GSMUA_AchrUn_... Banana vacuole 40.27 40.97
KRH07991 Soybean nucleus 40.08 40.7
Solyc02g083460.2.1 Tomato extracellular 40.84 39.7
PGSC0003DMT400009406 Potato plasma membrane, vacuole 40.46 39.33
PGSC0003DMT400058018 Potato vacuole 40.84 39.12
CDY02252 Canola golgi, plasma membrane, vacuole 23.09 38.78
Bra013063.1-P Field mustard plasma membrane 20.8 37.59
AT3G51330.1 Thale cress extracellular, plasma membrane, vacuole 37.79 37.43
CDX90651 Canola plasma membrane 37.98 37.27
TraesCS6D01G282400.2 Wheat plasma membrane 36.26 37.04
CDY29013 Canola plasma membrane 37.6 36.89
AT3G51350.1 Thale cress extracellular, plasma membrane, vacuole 36.83 36.55
AT3G51360.9 Thale cress vacuole 34.16 35.94
Bra012857.1-P Field mustard plasma membrane 30.73 35.7
CDY20815 Canola plasma membrane, plastid, vacuole 41.03 35.66
CDX77999 Canola vacuole 36.45 35.63
Bra036814.1-P Field mustard vacuole 32.82 35.61
Bra036815.1-P Field mustard vacuole 36.83 35.61
CDX73728 Canola vacuole 36.26 35.32
CDX73727 Canola vacuole 32.82 34.89
KRH69733 Soybean nucleus 40.08 34.88
CDX78000 Canola vacuole 32.82 34.13
AT3G51340.1 Thale cress plasma membrane 33.59 33.21
TraesCS5D01G532900.3 Wheat extracellular 14.12 25.78
TraesCS2D01G273200.1 Wheat extracellular, plasma membrane, vacuole 21.76 23.36
TraesCS7D01G390900.1 Wheat vacuole 21.56 23.06
TraesCS3D01G311700.2 Wheat plasma membrane 21.95 23.0
TraesCS4D01G094200.1 Wheat plasma membrane, vacuole 17.75 22.57
TraesCS5D01G128800.1 Wheat plasma membrane, vacuole 17.94 20.84
TraesCS4D01G094300.1 Wheat plasma membrane, vacuole 15.65 20.81
TraesCS5D01G533000.1 Wheat plastid 18.13 20.79
TraesCS4D01G072000.1 Wheat cytosol, mitochondrion, plastid, vacuole 16.79 20.61
TraesCS4D01G364900.1 Wheat unclear 16.03 20.49
TraesCS4D01G365000.1 Wheat plasma membrane, vacuole 15.84 20.24
TraesCS4D01G100300.1 Wheat extracellular, plasma membrane 15.46 19.52
TraesCS4D01G100200.1 Wheat extracellular, golgi 13.74 19.1
TraesCS6D01G089100.1 Wheat cytosol, peroxisome, vacuole 10.5 18.64
TraesCS6D01G272600.1 Wheat endoplasmic reticulum, peroxisome, vacuole 18.7 17.66
TraesCS7D01G211000.1 Wheat endoplasmic reticulum, peroxisome, vacuole 16.41 17.03
TraesCS2D01G192000.1 Wheat plasma membrane, plastid, vacuole 19.85 16.46
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASGO:GO:0003674GO:GO:0003824
GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538
InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792
ScanProsite:PS00141PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF232InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630
InterPro:TAXi_CInterPro:TAXi_NEnsemblPlantsGene:TraesCS7D01G524300EnsemblPlants:TraesCS7D01G524300.1SEG:seg:
Description
No Description!
Coordinates
chr7D:-:620256278..620258464
Molecular Weight (calculated)
54829.8 Da
IEP (calculated)
6.370
GRAVY (calculated)
0.008
Length
524 amino acids
Sequence
(BLAST)
001: MAVAAALAAA GEASSGIGFD LHHRSSPVVR RWAEARGHPG AAWWAEAEGT PEYYAALSRH DRAHLARRGL AEGDGGKGGL LTFASGNLTF RLDGSLHYAE
101: VAVGTPNATF LVALDTGSDL FWVPCDCKQC APIANASELR GGPELRPYSP GKSSTSKAVT CEHALCERPN ACAAAGNSSS SCPYSVRYVS ANTSSSGVLV
201: EDVLHLSRQT GGLSTAVKAP VVLGCGQVQT GAFLDGAAVD GLLGLGMDKV SVPSVLHAAG LVASDSFSMC FSPDGLGRIN FGDAGRPGQA ETPFTIRNTH
301: PTYNISVTAM TVEGKELAAE FAAVVDSGTS FTYLNDPAYT ELATSFDSQV REKRANLSAS IPFQYCYQLA RGQTELFVPE VSLTTRGGAV FPVTRPFVLI
401: AGETSDGQMV AVGYCLAVLQ NDIAIDIIGQ NFMTGLKVVF DRERSVLGWH QFDCYKDVEK EAHGGSPGAA PGPSPTTRIR PRQSVPYPGA VPVTPRQPGS
501: GGSRLSFFSM SLLLPLLAAA ASMV
Best Arabidopsis Sequence Match ( AT2G17760.1 )
(BLAST)
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.