Factsheet for VIT_00s0510g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

nucleus 1
vacuole 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	mitochondrion, nucleus, plasma membrane, vacuole
BaCelLo:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_19s0015g01790.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17760.1	VIT_19s0015g01790.t01	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010765	Potato	cytosol	29.09	47.85
GSMUA_Achr1P07410_001	Banana	cytosol	21.57	47.14
Solyc03g033360.1.1	Tomato	plastid	52.29	41.13
KRH28845	Soybean	vacuole	56.54	34.06
KRH76603	Soybean	vacuole	56.21	33.86
Bra002086.1-P	Field mustard	extracellular, plasma membrane, vacuole	55.23	33.6
CDY29199	Canola	vacuole	55.23	33.07
Bra024490.1-P	Field mustard	vacuole	55.23	33.07
CDY07819	Canola	vacuole	55.23	33.07
CDY24371	Canola	extracellular, plasma membrane, vacuole	55.23	33.01
Solyc02g083460.2.1	Tomato	extracellular	57.84	32.84
AT2G17760.1	Thale cress	golgi, plasma membrane, vacuole	54.58	32.55
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	56.86	32.28
KRH07991	Soybean	nucleus	54.25	32.17
VIT_00s0434g00080.t01	Wine grape	plasma membrane, vacuole	50.98	30.12
Os09t0542100-01	Rice	plasma membrane	47.71	29.8
GSMUA_Achr4P05070_001	Banana	plasma membrane, vacuole	42.81	29.24
TraesCS2D01G065800.1	Wheat	vacuole	48.69	29.22
TraesCS2A01G067500.1	Wheat	vacuole	48.69	29.04
PGSC0003DMT400058018	Potato	vacuole	51.63	28.88
EER99278	Sorghum	extracellular, plasma membrane, vacuole	49.35	28.87
Zm00001d022600_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	48.04	28.82
TraesCS2B01G079700.1	Wheat	vacuole	48.37	28.79
KXG25917	Sorghum	vacuole	48.04	28.43
CDY20815	Canola	plasma membrane, plastid, vacuole	55.23	28.03
TraesCS5A01G335500.1	Wheat	extracellular, plasma membrane, vacuole	47.39	27.88
KRH69733	Soybean	nucleus	54.58	27.74
TraesCS5B01G334700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.73	27.71
Zm00001d004132_P001	Maize	extracellular	46.73	27.61
TraesCS5D01G340300.1	Wheat	extracellular, plasma membrane, vacuole	46.73	27.5
Os04t0228000-01	Rice	extracellular, vacuole	46.73	26.98
GSMUA_Achr1P07390_001	Banana	extracellular, vacuole	45.1	26.8
GSMUA_AchrUn_...	Banana	vacuole	44.77	26.6
GSMUA_Achr2P03530_001	Banana	plasma membrane	45.1	26.49
Bra012857.1-P	Field mustard	plasma membrane	38.89	26.39
Os06t0717900-02	Rice	extracellular	47.39	26.32
GSMUA_Achr7P03880_001	Banana	extracellular	36.93	25.68
HORVU5Hr1G084490.1	Barley	vacuole	46.41	25.63
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	37.58	25.61
AT3G51330.1	Thale cress	extracellular, plasma membrane, vacuole	43.79	25.33
TraesCS7D01G524300.1	Wheat	plastid	43.14	25.19
HORVU7Hr1G118020.3	Barley	extracellular, plasma membrane, vacuole	44.12	25.14
TraesCS7A01G537200.1	Wheat	plasma membrane	43.14	24.67
EER88970	Sorghum	vacuole	43.46	24.58
Zm00001d014804_P001	Maize	extracellular	43.46	24.49
AT3G51350.1	Thale cress	extracellular, plasma membrane, vacuole	41.5	24.05
AT3G51360.9	Thale cress	vacuole	38.56	23.69
CDY29013	Canola	plasma membrane	40.85	23.41
CDX90651	Canola	plasma membrane	40.85	23.41
Bra036815.1-P	Field mustard	vacuole	41.18	23.25
CDX77999	Canola	vacuole	40.52	23.13
CDX73727	Canola	vacuole	37.25	23.12
Zm00001d036037_P001	Maize	vacuole	43.46	23.09
CDX73728	Canola	vacuole	40.52	23.05
Bra036814.1-P	Field mustard	vacuole	35.95	22.77
CDX78000	Canola	vacuole	36.6	22.22
AT3G51340.1	Thale cress	plasma membrane	38.24	22.08
EER89124	Sorghum	extracellular, vacuole	41.18	21.91
VIT_07s0031g01170.t01	Wine grape	extracellular, plasma membrane, vacuole	37.25	21.51
VIT_18s0001g04790.t01	Wine grape	plasma membrane, plastid, vacuole	34.31	20.15
Bra013063.1-P	Field mustard	plasma membrane	15.03	15.86
CDY02252	Canola	golgi, plasma membrane, vacuole	15.03	14.74
VIT_07s0031g02620.t01	Wine grape	extracellular, plasma membrane	19.28	13.85
VIT_06s0061g01030.t01	Wine grape	vacuole	20.91	13.22
VIT_18s0001g02420.t01	Wine grape	vacuole	17.97	13.19
VIT_04s0023g00730.t01	Wine grape	plasma membrane, vacuole	20.59	13.12
VIT_08s0007g04390.t01	Wine grape	extracellular, plasma membrane, vacuole	20.91	12.75
VIT_05s0062g01370.t01	Wine grape	plasma membrane, vacuole	19.93	12.15
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	17.32	11.21
VIT_18s0001g09470.t01	Wine grape	plasma membrane, vacuole	22.55	10.47
VIT_07s0129g00600.t01	Wine grape	extracellular	21.57	10.43
GSMUA_Achr1P07400_001	Banana	cytosol, plasma membrane, plastid	2.29	4.38

Protein Annotations

EntrezGene:100259162	wikigene:100259162	MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS
ProteinID:CBI25840	ProteinID:CBI25840.3	UniProt:D7T5Q6	EMBL:FN595546	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	EntrezGene:LOC100259162	wikigene:LOC100259162
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF232	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0001BE2DB9
ArrayExpress:VIT_00s0510g00050	EnsemblPlantsGene:VIT_00s0510g00050	EnsemblPlants:VIT_00s0510g00050.t01	unigene:Vvi.8332	RefSeq:XP_002269916	RefSeq:XP_002269916.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:30964393..30966631

Molecular Weight (calculated)

32640.3 Da

IEP (calculated)

3.955

GRAVY (calculated)

0.017

Length

306 amino acids

Sequence
(BLAST)

001: NTCDTMCFFG CSCGKVQTGS FLEGAAPNGL FGLGMGSISV PSILAKEGLV ADSFSMCFGN DGTGRISFGD EGSSGQEETP FNPSKSQLLY NISITQISVG
101: GTSADLNFDA IFDSGTSFTY LNDPAYTSIS ESFNLRAKDK RSSSDSDLPF EYCYDISEQQ TTVEYPIVNL TMKGGDNFFV TDPIVIVSIQ GGYVYCLGVV
201: KSGDINIIGQ NFMTGYRIIF DREKMVLGWT KSNCYDTEES NTLPINPANS PVVPPTVSVE PEATAGNGNG SHISEAPSPL ANGSPTWNSF ILALLMVFLP
301: ILASIL

Best Arabidopsis Sequence Match ( AT4G35880.1 )
(BLAST)

001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV

Arabidopsis Description

AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.