Factsheet for VIT_00s0434g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69730	Soybean	extracellular, plasma membrane, vacuole	71.04	70.23
KRH07987	Soybean	endoplasmic reticulum, plasma membrane, vacuole	69.11	68.98
PGSC0003DMT400009410	Potato	plasma membrane, vacuole	65.25	65.76
AT4G35880.1	Thale cress	plasma membrane	66.02	65.27
Solyc02g083450.2.1	Tomato	vacuole	65.44	65.07
CDX75536	Canola	endoplasmic reticulum, plasma membrane, vacuole	65.64	64.27
CDX69179	Canola	plasma membrane	65.64	64.03
Bra011646.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	65.44	63.96
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	30.12	50.98
VIT_07s0031g01170.t01	Wine grape	extracellular, plasma membrane, vacuole	37.26	36.42
VIT_18s0001g04790.t01	Wine grape	plasma membrane, plastid, vacuole	33.98	33.78
VIT_04s0023g00730.t01	Wine grape	plasma membrane, vacuole	22.39	24.17
VIT_08s0007g04390.t01	Wine grape	extracellular, plasma membrane, vacuole	22.59	23.31
VIT_06s0061g01030.t01	Wine grape	vacuole	21.43	22.93
VIT_07s0031g02620.t01	Wine grape	extracellular, plasma membrane	17.95	21.83
VIT_05s0062g01370.t01	Wine grape	plasma membrane, vacuole	20.85	21.51
VIT_18s0001g02420.t01	Wine grape	vacuole	16.41	20.38
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	16.6	18.18
VIT_18s0001g09470.t01	Wine grape	plasma membrane, vacuole	19.88	15.63
VIT_07s0129g00600.t01	Wine grape	extracellular	18.73	15.32

Protein Annotations

EntrezGene:100264340	wikigene:100264340	MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS
ProteinID:CBI28369	ProteinID:CBI28369.3	UniProt:D7TCZ6	EMBL:FN595758	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
InterPro:IPR021109	InterPro:IPR033121	EntrezGene:LOC100264340	wikigene:LOC100264340	InterPro:PEPTIDASE_A1	PFAM:PF14541
PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF384
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI00019831C8
ArrayExpress:VIT_00s0434g00080	EnsemblPlantsGene:VIT_00s0434g00080	EnsemblPlants:VIT_00s0434g00080.t01	RefSeq:XP_002269880	RefSeq:XP_002269880.1	SEG:seg

Description

No Description!

Coordinates

chrUn:+:28931224..28934847

Molecular Weight (calculated)

57240.0 Da

IEP (calculated)

5.633

GRAVY (calculated)

-0.035

Length

518 amino acids

Sequence
(BLAST)

001: MAFSWSVFIV ILLSILGFRS CHARIFSFQM HHRFSEPVKK WSEGAGNGFP AGNWPAKGSF EYYAELAHRD RALRGRRLSD IDGLLTFSDG NSTFRISSLG
101: FLHYTTVSLG TPGKKFLVAL DTGSDLFWVP CDCSRCAPTE GTTYASDFEL SIYNPKGSST SRKVTCDNSL CAHRNRCLGT FSNCPYMVSY VSAETSTSGI
201: LVEDVLHLTT EDNRQEFVEA YVTFGCGQVQ TGSFLDIAAP NGLFGLGLEK ISVPSILSKE GFTADSFSMC FGPDGIGRIS FGDKGSPDQE ETPFNLNALH
301: PTYNITVTQV RVGTTLIDLD FTALFDSGTS FTYLVDPIYT NVLKSFHSQA QDSRRPPDSR IPFEFCYDMS PGENTSLIPS MSLTMKGGSQ FPVYDPIIII
401: SSQSELIYCM AVVRSAELNI IGQNFMTGYR IIFDREKLVL GWKEFECDDI ENSSVPIRPR ATSVPPAVAV GVGNDTTKST RDTRNFSQSR NSVASPLFHR
501: ITPELTCFIL LFILLLLL

Best Arabidopsis Sequence Match ( AT4G35880.1 )
(BLAST)

001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV

Arabidopsis Description

AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.