Factsheet for VIT_17s0000g03880.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	61.52	52.15
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	60.89	51.25
CDY60079	Canola	cytosol	57.08	50.09
Bra032272.1-P	Field mustard	cytosol	56.87	49.91
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	57.29	49.72
KRH39216	Soybean	nucleus, peroxisome, vacuole	59.83	49.48
KRH48461	Soybean	nucleus, peroxisome, vacuole	59.83	49.3
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	57.29	48.13
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	59.2	48.03
EES05585	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	54.12	45.96
TraesCS7D01G211000.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	47.57	44.55
HORVU6Hr1G072910.3	Barley	cytosol, endoplasmic reticulum, peroxisome	51.8	44.3
TraesCS7B01G115900.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	47.36	44.09
Zm00001d051761_P001	Maize	endoplasmic reticulum, peroxisome, vacuole	53.91	43.97
TraesCS7A01G208600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.36	43.92
TraesCS6A01G291200.1	Wheat	vacuole	50.95	43.82
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	53.07	43.8
TraesCS6B01G321200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	51.37	43.7
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	50.95	43.42
Os06t0268700-01	Rice	vacuole	49.26	43.31
HORVU7Hr1G042490.1	Barley	endoplasmic reticulum, peroxisome, vacuole	46.51	43.31
VIT_07s0031g02620.t01	Wine grape	extracellular, plasma membrane	37.63	41.78
KXG19766	Sorghum	cytosol, plastid, vacuole	44.4	40.08
Zm00001d045695_P001	Maize	cytosol, endoplasmic reticulum, vacuole	44.82	39.63
VIT_18s0001g02420.t01	Wine grape	vacuole	33.62	38.13
VIT_06s0061g01030.t01	Wine grape	vacuole	24.74	24.17
VIT_04s0023g00730.t01	Wine grape	plasma membrane, vacuole	23.89	23.54
VIT_05s0062g01370.t01	Wine grape	plasma membrane, vacuole	24.52	23.11
VIT_08s0007g04390.t01	Wine grape	extracellular, plasma membrane, vacuole	24.31	22.91
VIT_18s0001g04790.t01	Wine grape	plasma membrane, plastid, vacuole	20.72	18.81
VIT_07s0031g01170.t01	Wine grape	extracellular, plasma membrane, vacuole	20.93	18.68
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	11.21	17.32
VIT_07s0129g00600.t01	Wine grape	extracellular	22.41	16.75
VIT_18s0001g09470.t01	Wine grape	plasma membrane, vacuole	23.26	16.69
VIT_00s0434g00080.t01	Wine grape	plasma membrane, vacuole	18.18	16.6

Protein Annotations

EntrezGene:100261096	wikigene:100261096	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A25	InterPro:Aspartic_peptidase_A1
InterPro:Aspartic_peptidase_AS	ProteinID:CBI15437	ProteinID:CBI15437.3	UniProt:D7SIX6	EMBL:FN594950	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121
EntrezGene:LOC100261096	wikigene:LOC100261096	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792
ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF334	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	TIGR:TC59498	UniParc:UPI0001BE0C5C	ArrayExpress:VIT_17s0000g03880
EnsemblPlantsGene:VIT_17s0000g03880	EnsemblPlants:VIT_17s0000g03880.t01	unigene:Vvi.10750	RefSeq:XP_002275943	RefSeq:XP_002275943.1	SEG:seg

Description

No Description!

Coordinates

chr17:-:3799123..3805862

Molecular Weight (calculated)

52437.1 Da

IEP (calculated)

8.001

GRAVY (calculated)

-0.090

Length

473 amino acids

Sequence
(BLAST)

001: MGFLGVSLFV FLLWNFASSS PLVELRRKND DREPTSFILP LYPKLGSRSL GDLELKLGKF VDFHVNDMKP GGINKLATSV SAFDSSTIFP VRGDVYPNGL
101: YFTHIFVGSP PRRYFLDMDT GSDLTWIQCD APCTSCAKGP NPLYKPKKGN LVPLKDSLCV EVQRNLKTGY CETCEQCDYE IEYADHSSSM GVLASDDLHL
201: MLANGSLTKL GIMFGCAYDQ QGLLLNSLAK TDGILGLSKA KVSLPSQLAS QRIINNVLGH CLTSDATGGG YMFLGDDFVP YWGMAWVPML NSHSPNYHSQ
301: IMKISHGSRQ LSLGRQDGRT ERVVFDTGSS YTYFPKEAYY ALVASLKDVS DEGLIQDGSD PTLPVCWRAK FPIRSVIDVK QFFQPLTLQF RSKWWIVSTK
401: FRIPPEGYLI ISNKGNVCLG ILDGSNVHDG STIILGDISL RGKLVVYDNV NQKIGWAQST CVKPQKIKSL PFF

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.