CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

nucleus 1
plastid 2
vacuole 1
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045695_P001	Maize	cytosol, endoplasmic reticulum, vacuole	78.44	76.82
HORVU7Hr1G042490.1	Barley	endoplasmic reticulum, peroxisome, vacuole	53.82	55.51
TraesCS7A01G208600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	53.82	55.29
TraesCS7D01G211000.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.86	54.85
Os06t0268700-01	Rice	vacuole	55.73	54.28
TraesCS7B01G115900.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.29	53.94
EES05585	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	52.29	49.19
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	49.05	47.16
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	40.08	44.4
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	40.65	38.17
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	40.65	37.9
CDY60079	Canola	cytosol	38.74	37.66
Bra032272.1-P	Field mustard	cytosol	38.74	37.66
KRH39216	Soybean	nucleus, peroxisome, vacuole	41.03	37.59
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	40.84	36.71
EES09417	Sorghum	plasma membrane, vacuole	29.01	36.63
KRH48461	Soybean	nucleus, peroxisome, vacuole	39.89	36.41
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	38.55	35.88
EES08111	Sorghum	vacuole	26.53	34.07
KXG23105	Sorghum	plasma membrane, vacuole	29.2	33.41
EES09418	Sorghum	endoplasmic reticulum, golgi, vacuole	25.76	33.09
KXG33497	Sorghum	vacuole	21.56	22.33
EES14146	Sorghum	plasma membrane	20.04	21.3
OQU84933	Sorghum	extracellular, vacuole	19.47	20.82
EES03170	Sorghum	plasma membrane, vacuole	19.27	20.65
EER99278	Sorghum	extracellular, plasma membrane, vacuole	18.13	18.16
KXG25917	Sorghum	vacuole	17.56	17.8
KXG30744	Sorghum	extracellular, vacuole	17.56	17.73
EER88970	Sorghum	vacuole	17.94	17.38
EER99637	Sorghum	plasma membrane	19.66	16.3
EER89124	Sorghum	extracellular, vacuole	17.37	15.83

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	UniProt:A0A194YJI6	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	EnsemblPlants:KXG19766	ProteinID:KXG19766
ProteinID:KXG19766.1	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF396	InterPro:Peptidase_aspartic_dom_sf	EnsemblPlantsGene:SORBI_3010G112200	SUPFAM:SSF50630
InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI0001C804E1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:11580886..11585352

Molecular Weight (calculated)

57548.6 Da

IEP (calculated)

5.025

GRAVY (calculated)

-0.405

Length

524 amino acids

Sequence
(BLAST)

001: MAAATPPVTS PPGPRKEDAR PRLPNGYVMI VVPNDGRDLP ASSPPHDGYD GPDKEDEEEE PRATSSLWRP AVLALAALAA VAAGYVCLQY AGGDAAGAAW
101: RLLETREEDG DGRGRRSFLL PLYPKPRRGG ATKLASGGDW PHNSTANLFP EGMYYTTVSL GNPPRPYFLD VDTGSHTTWI QCDAPCTSCA EGAHPLYRPA
201: PANLVPASDP LCQRVQHDNP NQCDYDISFA DGSSSMGVHV RDNMQFISED GERENADIVF GCGYDQQGIL LNRLENTDGI LGLSNRALSL PTQLASRGII
301: SNVFGHCMTR DPSGGGYLFL GDDYLPRWGM TWVPIRDGPA DDIRRARVQQ VNHGDQQLNV QGKLIQVVFD TGSTYTYFPN EALTKLISSL KAASPRFVQD
401: DADKTLPFCM KADFPVRSVD DVKHFFKPLS LQFEKRFFFS RTFNIRPEDY LVISDKGNVC LGVLDGTTIG YDSVIIVGDV SLRGKLIAYD NDKNEVGWID
501: SDCSNPQQSR IPSFLRRALH NQLL

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.