CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, vacuole, peroxisome

Predictor Summary:

nucleus 1
plastid 2
vacuole 1
plasma membrane 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051761_P001	Maize	endoplasmic reticulum, peroxisome, vacuole	92.46	88.79
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	83.84	81.5
TraesCS6A01G291200.1	Wheat	vacuole	80.25	81.27
TraesCS6B01G321200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	80.97	81.12
HORVU6Hr1G072910.3	Barley	cytosol, endoplasmic reticulum, peroxisome	80.43	81.01
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	80.43	80.72
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	58.17	59.45
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	45.96	54.12
KXG19766	Sorghum	cytosol, plastid, vacuole	49.19	52.29
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	46.32	46.24
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	46.32	45.91
Bra032272.1-P	Field mustard	cytosol	43.81	45.27
CDY60079	Canola	cytosol	43.81	45.27
KRH39216	Soybean	nucleus, peroxisome, vacuole	46.14	44.93
KRH48461	Soybean	nucleus, peroxisome, vacuole	45.78	44.43
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	44.88	44.41
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	46.32	44.25
EES09417	Sorghum	plasma membrane, vacuole	28.9	38.8
KXG23105	Sorghum	plasma membrane, vacuole	31.78	38.65
EES09418	Sorghum	endoplasmic reticulum, golgi, vacuole	25.85	35.29
EES08111	Sorghum	vacuole	25.67	35.05
EES14146	Sorghum	plasma membrane	20.83	23.53
OQU84933	Sorghum	extracellular, vacuole	20.11	22.86
EES03170	Sorghum	plasma membrane, vacuole	19.93	22.7
KXG33497	Sorghum	vacuole	20.11	22.13
EER99278	Sorghum	extracellular, plasma membrane, vacuole	18.31	19.5
KXG30744	Sorghum	extracellular, vacuole	17.95	19.27
KXG25917	Sorghum	vacuole	17.77	19.15
EER88970	Sorghum	vacuole	18.49	19.04
EER89124	Sorghum	extracellular, vacuole	18.49	17.91
EER99637	Sorghum	plasma membrane	19.03	16.77

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	EntrezGene:8077693	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	UniProt:C5XZC9
EnsemblPlants:EES05585	ProteinID:EES05585	ProteinID:EES05585.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	InterPro:Nucellin	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF334	InterPro:Peptidase_aspartic_dom_sf	EnsemblPlantsGene:SORBI_3004G250300	SUPFAM:SSF50630	unigene:Sbi.3713	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI0001A85522	RefSeq:XP_002452609.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:59683086..59686742

Molecular Weight (calculated)

61757.5 Da

IEP (calculated)

7.814

GRAVY (calculated)

-0.379

Length

557 amino acids

Sequence
(BLAST)

001: MPPPPPPPAG AQQPQLHGVV IITLPPSDQP SKGKTITAFT YTDDAPPPPR PPEPVMGYPA ATQVRRRPRR VLSTRRVAAA ALVLGALAVA AYYCFYSDVA
101: VQFLGMEQEE AQKDRNETRS FLLPLHPKAR QGRALREFGD VKLAARRIDD GWRKARNKME VAKAAAAGTN STALLPIKGN VFPDGQYYTS IFVGNPPRPY
201: FLDVDTGSDL TWIQCDAPCT NCAKGPHPLY KPTKEKIVPP RDLLCQELQG NQNYCETCKQ CDYEIEYADQ SSSMGVLARD DMHLIATNGG REKLDFVFGC
301: AYDQQGQLLS SPAKTDGILG LSNAAISLPS QLASHGIISN IFGHCITREQ GGGGYMFLGD DYVPRWGITW TSIRSGPDNL YHTEAHHVKY GDQQLRMREQ
401: AGNTVQVIFD SGSSYTYLPD EIYENLVAAI KYASPGFVQD SSDRTLPLCW KADFPVRYLE DVKQFFKPLN LHFGKKWLFM SKTFTISPED YLIISDKGNV
501: CLGLLNGTEI NHGSTIIVGD VSLRGKLVVY DNQRRQIGWT NSDCTKPQSQ KGFPFFL

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.