Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17760.1 | EER96942 | AT4G26455.1 | 21798944 |
| AT2G17760.1 | EES14314 | AT4G26455.1 | 21798944 |
| AT2G17760.1 | OQU81760 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022600_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 88.72 | 90.98 |
| TraesCS5B01G334700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 75.53 | 76.55 |
| TraesCS5D01G340300.1 | Wheat | extracellular, plasma membrane, vacuole | 74.95 | 75.38 |
| TraesCS5A01G335500.1 | Wheat | extracellular, plasma membrane, vacuole | 74.76 | 75.19 |
| Os09t0542100-01 | Rice | plasma membrane | 66.16 | 70.61 |
| HORVU5Hr1G084490.1 | Barley | vacuole | 73.23 | 69.13 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 44.36 | 51.67 |
| GSMUA_Achr7P03880_001 | Banana | extracellular | 41.68 | 49.55 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 28.87 | 49.35 |
| GSMUA_AchrUn_... | Banana | vacuole | 48.37 | 49.13 |
| PGSC0003DMT400010765 | Potato | cytosol | 17.4 | 48.92 |
| KXG25917 | Sorghum | vacuole | 47.04 | 47.58 |
| Bra002086.1-P | Field mustard | extracellular, plasma membrane, vacuole | 43.79 | 45.53 |
| Solyc03g033360.1.1 | Tomato | plastid | 33.65 | 45.24 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 43.98 | 44.92 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 43.98 | 44.83 |
| CDY07819 | Canola | vacuole | 43.59 | 44.62 |
| CDY29199 | Canola | vacuole | 43.4 | 44.42 |
| Bra024490.1-P | Field mustard | vacuole | 43.4 | 44.42 |
| KRH28845 | Soybean | vacuole | 43.02 | 44.29 |
| KRH76603 | Soybean | vacuole | 42.64 | 43.9 |
| KRH07991 | Soybean | nucleus | 42.83 | 43.41 |
| Solyc02g083460.2.1 | Tomato | extracellular | 44.36 | 43.04 |
| EER88970 | Sorghum | vacuole | 43.98 | 42.51 |
| PGSC0003DMT400009406 | Potato | plasma membrane, vacuole | 43.59 | 42.3 |
| PGSC0003DMT400058018 | Potato | vacuole | 43.4 | 41.5 |
| Bra036814.1-P | Field mustard | vacuole | 37.28 | 40.37 |
| CDX73727 | Canola | vacuole | 37.48 | 39.76 |
| EER89124 | Sorghum | extracellular, vacuole | 43.59 | 39.65 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 23.52 | 39.42 |
| Bra013063.1-P | Field mustard | plasma membrane | 21.8 | 39.31 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 39.39 | 38.94 |
| CDX78000 | Canola | vacuole | 37.48 | 38.89 |
| AT3G51360.9 | Thale cress | vacuole | 36.9 | 38.76 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 43.98 | 38.14 |
| KXG30744 | Sorghum | extracellular, vacuole | 37.67 | 37.96 |
| CDX90651 | Canola | plasma membrane | 38.62 | 37.83 |
| CDY29013 | Canola | plasma membrane | 38.43 | 37.64 |
| Bra036815.1-P | Field mustard | vacuole | 39.01 | 37.64 |
| CDX73728 | Canola | vacuole | 38.43 | 37.36 |
| CDX77999 | Canola | vacuole | 38.24 | 37.31 |
| KRH69733 | Soybean | nucleus | 42.83 | 37.21 |
| AT3G51340.1 | Thale cress | plasma membrane | 36.71 | 36.23 |
| Bra012857.1-P | Field mustard | plasma membrane | 30.78 | 35.7 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 35.95 | 35.61 |
| EES14146 | Sorghum | plasma membrane | 23.33 | 24.75 |
| EES03170 | Sorghum | plasma membrane, vacuole | 22.94 | 24.54 |
| EES09418 | Sorghum | endoplasmic reticulum, golgi, vacuole | 18.36 | 23.53 |
| OQU84933 | Sorghum | extracellular, vacuole | 21.8 | 23.27 |
| EES08111 | Sorghum | vacuole | 17.78 | 22.79 |
| EES09417 | Sorghum | plasma membrane, vacuole | 17.97 | 22.65 |
| KXG23105 | Sorghum | plasma membrane, vacuole | 19.5 | 22.27 |
| KXG33497 | Sorghum | vacuole | 21.41 | 22.13 |
| EES05585 | Sorghum | endoplasmic reticulum, peroxisome, plastid, vacuole | 19.5 | 18.31 |
| KXG19766 | Sorghum | cytosol, plastid, vacuole | 18.16 | 18.13 |
| EER99637 | Sorghum | plasma membrane | 19.69 | 16.3 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EntrezGene:8054982 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | UniProt:C5X6X8 |
| EnsemblPlants:EER99278 | ProteinID:EER99278 | ProteinID:EER99278.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0030163 | InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 |
| PFAM:PF14543 | PRINTS:PR00792 | ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF407 |
| InterPro:Peptidase_aspartic_dom_sf | EnsemblPlantsGene:SORBI_3002G281700 | SUPFAM:SSF50630 | unigene:Sbi.5298 | SignalP:SignalP-noTM | InterPro:TAXi_C |
| InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI0001A83DF9 | RefSeq:XP_002462757.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:-:66313138..66316738
Molecular Weight (calculated)
55304.3 Da
IEP (calculated)
5.654
GRAVY (calculated)
-0.013
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAWVRAALL AAAAVAAYTA AAAVPAEALS LDVHHRYSAT VREWAGHHRA PPAGTAEYYA ALARHDLRRR SLAAGPAAGG GGGGEVAFAD GNDTYRLNEL
101: GFLHYAVVAL GTPNVTFLVA LDTGSDLFWV PCDCINCAPL VSPNYRDLKF DTYSPQKSST SRKVPCSSNL CDLQSACRSA SSSCPYSIEY LSDNTSSTGV
201: LVEDVLYLIT EYGQPKIVTA PITFGCGRIQ TGSFLGSAAP NGLLGLGMDS ISVPSLLASE GVAANSFSMC FGDDGRGRIN FGDTGSSDQQ ETPLNIYKQN
301: PYYNISITGA MVGSKSFNTN FNAIVDSGTS FTALSDPMYS EITSSFNSQV QDKPTQLDSS LPFEFCYSIS PKGSVNPPNI SLMAKGGSIF PVNDPIITIT
401: DDASNPMAYC LAVMKSEGVN LIGENFMSGL KVVFDRERKV LGWKKFNCYS VDNSSNLPVN PNPSGVPPKP ALGPNSYTPE ATKGTSPNGT QVNVLQPSAG
501: FSLKLHCNRN VFVAAALLLL VIL
101: GFLHYAVVAL GTPNVTFLVA LDTGSDLFWV PCDCINCAPL VSPNYRDLKF DTYSPQKSST SRKVPCSSNL CDLQSACRSA SSSCPYSIEY LSDNTSSTGV
201: LVEDVLYLIT EYGQPKIVTA PITFGCGRIQ TGSFLGSAAP NGLLGLGMDS ISVPSLLASE GVAANSFSMC FGDDGRGRIN FGDTGSSDQQ ETPLNIYKQN
301: PYYNISITGA MVGSKSFNTN FNAIVDSGTS FTALSDPMYS EITSSFNSQV QDKPTQLDSS LPFEFCYSIS PKGSVNPPNI SLMAKGGSIF PVNDPIITIT
401: DDASNPMAYC LAVMKSEGVN LIGENFMSGL KVVFDRERKV LGWKKFNCYS VDNSSNLPVN PNPSGVPPKP ALGPNSYTPE ATKGTSPNGT QVNVLQPSAG
501: FSLKLHCNRN VFVAAALLLL VIL
001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV
Arabidopsis Description
AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.