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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • plasma membrane 1
  • plastid 1
  • extracellular 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, extracellular, plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400022426
PGSC0003DMT400056956

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G17760.1 PGSC0003DMT400022426 AT4G26455.1 21798944
AT2G17760.1 PGSC0003DMT400056956 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P07410_001 Banana cytosol 24.73 32.86
VIT_00s0510g00050.t01 Wine grape plasma membrane, vacuole 47.85 29.09
PGSC0003DMT400009406 Potato plasma membrane, vacuole 79.03 27.27
Solyc02g083460.2.1 Tomato extracellular 78.49 27.09
PGSC0003DMT400058018 Potato vacuole 62.37 21.21
KRH76603 Soybean vacuole 51.61 18.9
GSMUA_Achr4P05070_001 Banana plasma membrane, vacuole 45.16 18.75
Bra002086.1-P Field mustard extracellular, plasma membrane, vacuole 50.54 18.69
AT2G17760.1 Thale cress golgi, plasma membrane, vacuole 51.08 18.52
KRH28845 Soybean vacuole 50.54 18.5
CDY24371 Canola extracellular, plasma membrane, vacuole 50.54 18.36
KXG25917 Sorghum vacuole 50.54 18.18
Os09t0542100-01 Rice plasma membrane 47.85 18.16
Bra024490.1-P Field mustard vacuole 49.46 18.0
CDY29199 Canola vacuole 49.46 18.0
CDY07819 Canola vacuole 49.46 18.0
Zm00001d022600_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 48.92 17.84
Zm00001d004132_P001 Maize extracellular 49.46 17.76
TraesCS2A01G067500.1 Wheat vacuole 48.92 17.74
TraesCS2B01G079700.1 Wheat vacuole 48.92 17.7
TraesCS2D01G065800.1 Wheat vacuole 48.39 17.65
KRH07991 Soybean nucleus 48.39 17.44
TraesCS5B01G334700.1 Wheat endoplasmic reticulum, extracellular, vacuole 48.39 17.44
EER99278 Sorghum extracellular, plasma membrane, vacuole 48.92 17.4
GSMUA_AchrUn_... Banana plasma membrane, vacuole 41.94 17.37
GSMUA_Achr7P03880_001 Banana extracellular 40.86 17.27
TraesCS5A01G335500.1 Wheat extracellular, plasma membrane, vacuole 47.85 17.12
TraesCS5D01G340300.1 Wheat extracellular, plasma membrane, vacuole 47.85 17.12
GSMUA_Achr1P07390_001 Banana extracellular, vacuole 47.31 17.09
Os04t0228000-01 Rice extracellular, vacuole 47.85 16.79
PGSC0003DMT400009410 Potato plasma membrane, vacuole 46.24 16.73
GSMUA_Achr2P03530_001 Banana plasma membrane 46.77 16.7
Bra013063.1-P Field mustard plasma membrane 25.81 16.55
HORVU5Hr1G084490.1 Barley vacuole 47.85 16.07
TraesCS7D01G524300.1 Wheat plastid 44.62 15.84
EER88970 Sorghum vacuole 45.7 15.71
TraesCS7A01G537200.1 Wheat plasma membrane 45.16 15.7
HORVU7Hr1G118020.3 Barley extracellular, plasma membrane, vacuole 45.16 15.64
Bra012857.1-P Field mustard plasma membrane 37.63 15.52
CDY20815 Canola plasma membrane, plastid, vacuole 50.0 15.42
GSMUA_AchrUn_... Banana vacuole 42.47 15.34
KRH69733 Soybean nucleus 49.46 15.28
Zm00001d014804_P001 Maize extracellular 44.09 15.1
Bra036814.1-P Field mustard vacuole 38.71 14.91
Os06t0717900-02 Rice extracellular 44.09 14.88
AT3G51330.1 Thale cress extracellular, plasma membrane, vacuole 41.94 14.74
CDY02252 Canola golgi, plasma membrane, vacuole 24.73 14.74
CDX73727 Canola vacuole 38.71 14.6
AT3G51360.9 Thale cress vacuole 38.71 14.46
EER89124 Sorghum extracellular, vacuole 44.62 14.43
Zm00001d036037_P001 Maize vacuole 44.62 14.41
CDX90651 Canola plasma membrane 40.86 14.23
CDX78000 Canola vacuole 38.17 14.09
PGSC0003DMT400056847 Potato vacuole 30.65 13.97
CDY29013 Canola plasma membrane 39.78 13.86
CDX77999 Canola vacuole 39.78 13.81
Bra036815.1-P Field mustard vacuole 39.78 13.65
CDX73728 Canola vacuole 39.25 13.57
AT3G51340.1 Thale cress plasma membrane 37.63 13.21
AT3G51350.1 Thale cress extracellular, plasma membrane, vacuole 36.56 12.88
PGSC0003DMT400022458 Potato endoplasmic reticulum, extracellular, vacuole 36.02 12.48
PGSC0003DMT400027299 Potato endoplasmic reticulum, golgi, vacuole 25.27 10.8
PGSC0003DMT400071953 Potato vacuole 20.97 9.73
PGSC0003DMT400001138 Potato plasma membrane 25.81 9.64
PGSC0003DMT400060025 Potato endoplasmic reticulum, extracellular, vacuole 24.19 9.43
PGSC0003DMT400055639 Potato endoplasmic reticulum, plasma membrane, vacuole 24.19 9.38
PGSC0003DMT400013994 Potato vacuole 23.66 9.24
PGSC0003DMT400080179 Potato extracellular 21.51 9.15
PGSC0003DMT400037976 Potato vacuole 20.43 9.09
PGSC0003DMT400033805 Potato extracellular, plasma membrane, vacuole 23.66 8.8
PGSC0003DMT400034018 Potato golgi, plasma membrane, vacuole 22.58 8.77
PGSC0003DMT400022163 Potato cytosol, extracellular, plasma membrane 23.12 8.6
PGSC0003DMT400028148 Potato cytosol 22.04 8.12
PGSC0003DMT400030753 Potato extracellular 17.74 7.48
PGSC0003DMT400010418 Potato cytosol, nucleus, vacuole 20.43 6.81
PGSC0003DMT400073638 Potato plasma membrane 23.66 6.72
GSMUA_Achr1P07400_001 Banana cytosol, plasma membrane, plastid 3.23 3.75
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10InterPro:Aspartic_peptidase_A1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538InterPro:IPR021109
InterPro:IPR033121UniProt:M0ZYI9InterPro:PEPTIDASE_A1PFAM:PF14541EnsemblPlantsGene:PGSC0003DMG400004207PGSC:PGSC0003DMG400004207
EnsemblPlants:PGSC0003DMT400010765PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF232InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630
InterPro:TAXi_CUniParc:UPI00029613EFSEG:seg:::
Description
Aspartic proteinase nepenthesin-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400004207]
Coordinates
chr1:+:53707337..53708442
Molecular Weight (calculated)
20309.0 Da
IEP (calculated)
4.878
GRAVY (calculated)
-0.416
Length
186 amino acids
Sequence
(BLAST)
001: MEYEKPESLS VGRTKKVGKV IKKIGDTSNT EEENRCGIRQ TGAFLTGAAP NGLFGLGIEN ISAQSMLASK GLAANSFSMC FGPDGIGRIV FGDKGSPGQG
101: ETPLNLDQPY PTYNISLTGI TVGSKITDFD FRAIFDSSTS FTYLNDPVYK VITENFDSEA KRPRIQPYGE IPFEYCYGIK KKEEVD
Best Arabidopsis Sequence Match ( AT2G17760.1 )
(BLAST)
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.