Factsheet for GSMUA_Achr1P07410_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
extracellular 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P04120_001
GSMUA_Achr4P01630_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17760.1	GSMUA_Achr10P...	AT4G26455.1	21798944
AT2G17760.1	GSMUA_Achr3P04120_001	AT4G26455.1	21798944
AT2G17760.1	GSMUA_Achr4P01630_001	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010765	Potato	cytosol	32.86	24.73
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	47.14	21.57
GSMUA_Achr1P07390_001	Banana	extracellular, vacuole	68.57	18.64
GSMUA_Achr4P05070_001	Banana	plasma membrane, vacuole	55.0	17.19
Solyc03g033360.1.1	Tomato	plastid	45.0	16.2
GSMUA_Achr2P03530_001	Banana	plasma membrane	60.0	16.12
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	45.71	14.25
AT2G17760.1	Thale cress	golgi, plasma membrane, vacuole	48.57	13.26
GSMUA_Achr7P03880_001	Banana	extracellular	41.43	13.18
Bra024490.1-P	Field mustard	vacuole	47.86	13.11
CDY07819	Canola	vacuole	47.86	13.11
CDY29199	Canola	vacuole	47.86	13.11
GSMUA_AchrUn_...	Banana	vacuole	47.86	13.01
KRH76603	Soybean	vacuole	47.14	12.99
KRH28845	Soybean	vacuole	46.43	12.8
Bra002086.1-P	Field mustard	extracellular, plasma membrane, vacuole	45.0	12.52
CDY24371	Canola	extracellular, plasma membrane, vacuole	45.0	12.3
PGSC0003DMT400058018	Potato	vacuole	46.43	11.88
Solyc02g083460.2.1	Tomato	extracellular	45.71	11.87
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	45.0	11.69
KRH07991	Soybean	nucleus	42.86	11.63
Bra012857.1-P	Field mustard	plasma membrane	37.14	11.53
CDY20815	Canola	plasma membrane, plastid, vacuole	45.0	10.45
AT3G51330.1	Thale cress	extracellular, plasma membrane, vacuole	37.86	10.02
KRH69733	Soybean	nucleus	42.14	9.8
CDY29013	Canola	plasma membrane	37.14	9.74
CDX90651	Canola	plasma membrane	37.14	9.74
CDX77999	Canola	vacuole	37.14	9.7
CDX73728	Canola	vacuole	36.43	9.48
Bra036815.1-P	Field mustard	vacuole	36.43	9.41
CDX73727	Canola	vacuole	32.86	9.33
AT3G51360.9	Thale cress	vacuole	32.86	9.24
Bra036814.1-P	Field mustard	vacuole	31.43	9.11
AT3G51350.1	Thale cress	extracellular, plasma membrane, vacuole	33.57	8.9
CDX78000	Canola	vacuole	31.43	8.73
GSMUA_Achr5P22890_001	Banana	endoplasmic reticulum, plasma membrane	32.14	8.67
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	32.86	8.66
AT3G51340.1	Thale cress	plasma membrane	28.57	7.55
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	17.14	5.54
Bra013063.1-P	Field mustard	plasma membrane	11.43	5.52
GSMUA_Achr6P27900_001	Banana	golgi, vacuole	17.86	5.17
GSMUA_Achr3P17250_001	Banana	plasma membrane, vacuole	17.86	5.15
CDY02252	Canola	golgi, plasma membrane, vacuole	11.43	5.13
GSMUA_Achr6P17740_001	Banana	extracellular	15.71	4.87
GSMUA_Achr3P19030_001	Banana	vacuole	13.57	4.55
GSMUA_Achr8P15150_001	Banana	extracellular, plasma membrane, vacuole	16.43	4.51
GSMUA_Achr2P17680_001	Banana	vacuole	15.71	4.41
GSMUA_Achr3P18830_001	Banana	cytosol	17.86	4.37
GSMUA_Achr4P07210_001	Banana	cytosol, plastid, vacuole	17.14	4.29
GSMUA_Achr6P29770_001	Banana	extracellular, plasma membrane, vacuole	15.0	4.19
GSMUA_Achr4P14240_001	Banana	cytosol, peroxisome, plastid	16.43	4.09
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	15.71	4.04
GSMUA_Achr1P07400_001	Banana	cytosol, plasma membrane, plastid	2.14	1.88

Protein Annotations

EnsemblPlants:GSMUA_Achr1P07410_001	EnsemblPlants:GSMUA_Achr1T07410_001	EnsemblPlantsGene:GSMUA_Achr1G07410_001	Gene3D:2.40.70.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:Aspartic_peptidase_A1	InterPro:IPR021109	InterPro:Peptidase_aspartic_dom_sf	InterPro:TAXi_C	PANTHER:PTHR13683	PANTHER:PTHR13683:SF232
PFAM:PF14541	SUPFAM:SSF50630	UniParc:UPI0002966C13	UniProt:M0RXU9	MapMan:19.4.3.1	:

Description

Putative Aspartic proteinase-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G07410_001]

Coordinates

chr1:+:5789043..5789699

Molecular Weight (calculated)

15434.3 Da

IEP (calculated)

6.082

GRAVY (calculated)

-0.163

Length

140 amino acids

Sequence
(BLAST)

001: MCFGDDGLGR INIGDKGSWD QQEAAFIINK AHSNPSFKIN ITRIAVGNKS THMVFDAPVD SGTSFTALED PIYKYIAKSF NAQAQVKRYK TDPDSTFKYC
101: YELSLNQTSI LLPEINLTTH GGSVFPVSDP IIIFHGDAIL

Best Arabidopsis Sequence Match ( AT2G17760.1 )
(BLAST)

001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL

Arabidopsis Description

APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.