Factsheet for GSMUA_Achr6P30620_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G072910.3	Barley	cytosol, endoplasmic reticulum, peroxisome	59.27	58.41
EES05585	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	59.45	58.17
TraesCS6A01G291200.1	Wheat	vacuole	58.35	57.82
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	49.72	57.29
TraesCS6B01G321200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	58.35	57.19
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	59.82	56.89
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	57.8	56.76
Zm00001d051761_P001	Maize	endoplasmic reticulum, peroxisome, vacuole	57.61	54.14
Os06t0268700-01	Rice	vacuole	51.93	52.6
HORVU7Hr1G042490.1	Barley	endoplasmic reticulum, peroxisome, vacuole	47.34	50.79
TraesCS7B01G115900.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	46.97	50.39
TraesCS7A01G208600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.16	50.39
TraesCS7D01G211000.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	46.24	49.9
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	50.28	49.1
KXG19766	Sorghum	cytosol, plastid, vacuole	47.16	49.05
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	50.09	48.58
Bra032272.1-P	Field mustard	cytosol	47.52	48.05
CDY60079	Canola	cytosol	47.52	48.05
KRH39216	Soybean	nucleus, peroxisome, vacuole	49.72	47.38
KRH48461	Soybean	nucleus, peroxisome, vacuole	49.72	47.21
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	49.91	46.66
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	47.89	46.36
Zm00001d045695_P001	Maize	cytosol, endoplasmic reticulum, vacuole	45.14	45.98
GSMUA_Achr3P19030_001	Banana	vacuole	30.64	39.95
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	30.09	37.88
GSMUA_Achr6P17740_001	Banana	extracellular	30.64	36.95
GSMUA_Achr1P07400_001	Banana	cytosol, plasma membrane, plastid	7.34	25.0
GSMUA_Achr4P05070_001	Banana	plasma membrane, vacuole	19.08	23.21
GSMUA_Achr6P27900_001	Banana	golgi, vacuole	20.55	23.14
GSMUA_Achr3P17250_001	Banana	plasma membrane, vacuole	19.45	21.86
GSMUA_Achr6P29770_001	Banana	extracellular, plasma membrane, vacuole	20.0	21.76
GSMUA_Achr8P15150_001	Banana	extracellular, plasma membrane, vacuole	19.82	21.18
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	17.43	21.16
GSMUA_Achr2P17680_001	Banana	vacuole	18.72	20.44
GSMUA_Achr7P03880_001	Banana	extracellular	16.33	20.23
GSMUA_Achr2P03530_001	Banana	plasma membrane	18.35	19.19
GSMUA_Achr5P22890_001	Banana	endoplasmic reticulum, plasma membrane	18.17	19.08
GSMUA_Achr1P07390_001	Banana	extracellular, vacuole	16.88	17.86
GSMUA_Achr4P07210_001	Banana	cytosol, plastid, vacuole	18.35	17.86
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	17.25	17.7
GSMUA_Achr4P14240_001	Banana	cytosol, peroxisome, plastid	18.17	17.62
GSMUA_AchrUn_...	Banana	vacuole	16.51	17.48
GSMUA_Achr3P18830_001	Banana	cytosol	17.8	16.96
GSMUA_Achr1P07410_001	Banana	cytosol	4.04	15.71

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009605	GO:GO:0009607	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	GO:GO:0050832	EnsemblPlantsGene:GSMUA_Achr6G30620_001	EnsemblPlants:GSMUA_Achr6P30620_001	EnsemblPlants:GSMUA_Achr6T30620_001	InterPro:IPR021109
InterPro:IPR033121	UniProt:M0TBK7	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792
ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF334	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI0002960424	SEG:seg	:

Description

Putative Aspartic proteinase Asp1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G30620_001]

Coordinates

chr6:-:30569765..30580654

Molecular Weight (calculated)

60368.3 Da

IEP (calculated)

8.344

GRAVY (calculated)

-0.265

Length

545 amino acids

Sequence
(BLAST)

001: MERETERPPP PQLHGVVIIS LPPPDNPFKG KTITAFTLSD DAPPPPPHVP PAARSPLTRA ARRSLLSPRS AAAAVLGASL LLFSLWICLF SEAPMQLLDE
101: PSREEDGRRQ EEERSFLFPL YPKSGGRALR EVGGVKLGSI SRKRKQSGKM ETYASANSST VLPIGGNLFP DGQYYTTLFV GSSPRPYYLD VDTGSDLTWI
201: QCDAPCASCA KGPHPLYKPR KGNLVLPKDS LCLEVQKNQN NHYCDSCHQC DYEIEYADHS SSMGVLATDE MHLIAANGDR AKLNFVFGCA YDQQGQLLVS
301: PAKTDGILGL SSSRISLASQ LESQGIISNV IGHCIKRDAD GGGYLFLGDD YVPRWGMTLI PRQNDLTNFY RAKVLKINYG GKQVIGGKRG YAIPVIFDTG
401: SSYTYFPVEA YRKLITSLKT ISNIFVQDSS DLTMPICWRA NFPVRSFKDV KHFFQPLTLQ FEKRWWIMSR SFTIPPEGYL MISNKGNVCL GILNGTEVHD
501: GSTIILGDIS LRGKLIVYDN VQRTIGWTHS DCNNPQKATG FPFFF

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.