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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • mitochondrion 1
  • endoplasmic reticulum 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, vacuole
Any Predictor:cytosol, nucleus, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60079 Canola cytosol 92.54 96.66
AT1G49050.1 Thale cress cytosol, plastid, vacuole 78.33 75.64
VIT_17s0000g03880.t01 Wine grape extracellular, plasma membrane, vacuole 48.13 57.29
KRH39216 Soybean nucleus, peroxisome, vacuole 49.56 48.78
KRH48461 Soybean nucleus, peroxisome, vacuole 49.38 48.43
PGSC0003DMT400010418 Potato cytosol, nucleus, vacuole 47.78 48.21
GSMUA_Achr6P30620_001 Banana cytosol, nucleus, vacuole 46.36 47.89
Solyc06g069190.2.1 Tomato cytosol, nucleus, vacuole 47.42 47.51
EES05585 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 44.41 44.88
HORVU6Hr1G072910.3 Barley cytosol, endoplasmic reticulum, peroxisome 43.34 44.12
TraesCS6A01G291200.1 Wheat vacuole 42.98 44.0
TraesCS6B01G321200.1 Wheat endoplasmic reticulum, peroxisome, vacuole 42.81 43.35
TraesCS6D01G272600.1 Wheat endoplasmic reticulum, peroxisome, vacuole 42.45 43.06
Zm00001d051761_P001 Maize endoplasmic reticulum, peroxisome, vacuole 43.34 42.07
Os02t0730700-02 Rice cytosol, peroxisome, vacuole 42.63 41.88
TraesCS7B01G115900.1 Wheat endoplasmic reticulum, peroxisome, vacuole 36.77 40.75
TraesCS7A01G208600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 36.41 40.2
HORVU7Hr1G042490.1 Barley endoplasmic reticulum, peroxisome, vacuole 36.23 40.16
TraesCS7D01G211000.1 Wheat endoplasmic reticulum, peroxisome, vacuole 35.88 40.0
Os06t0268700-01 Rice vacuole 37.66 39.41
KXG19766 Sorghum cytosol, plastid, vacuole 35.88 38.55
Zm00001d045695_P001 Maize cytosol, endoplasmic reticulum, vacuole 36.41 38.32
CDX68982 Canola golgi, vacuole 28.06 36.74
CDX75359 Canola golgi, vacuole 27.53 36.13
CDY14973 Canola vacuole 26.29 36.1
CDY12535 Canola vacuole 24.69 35.37
CDY41786 Canola plasma membrane, vacuole 27.89 34.73
CDY10133 Canola vacuole 26.29 34.66
CDX88370 Canola plasma membrane, vacuole 27.89 34.13
CDX87518 Canola plasma membrane, vacuole 27.89 34.06
CDY18730 Canola extracellular, plasma membrane, vacuole 23.45 32.92
CDY51538 Canola vacuole 22.02 25.36
CDY28705 Canola vacuole 22.02 25.31
CDX75024 Canola vacuole 21.31 23.81
CDY33177 Canola extracellular, plasma membrane, vacuole 20.96 23.41
CDY68869 Canola extracellular, vacuole 17.94 23.17
CDY53740 Canola vacuole 16.52 22.96
CDY63001 Canola endoplasmic reticulum, plasma membrane, vacuole 19.54 22.77
CDY12353 Canola plasma membrane 19.01 22.67
CDY06183 Canola plasma membrane, vacuole 19.36 22.43
CDY37650 Canola extracellular, golgi 19.18 22.36
CDY22694 Canola endoplasmic reticulum, extracellular, vacuole 15.81 22.31
CDY10006 Canola extracellular, plasma membrane, vacuole 19.01 22.15
CDY55968 Canola plasma membrane 18.47 22.03
CDX92331 Canola extracellular, plasma membrane, vacuole 19.18 22.0
CDY41753 Canola golgi, plasma membrane, vacuole 18.83 21.99
CDY26962 Canola vacuole 19.01 21.79
CDY32825 Canola endoplasmic reticulum, plasma membrane 18.83 21.24
CDY06305 Canola endoplasmic reticulum, plasma membrane, vacuole 18.65 21.21
CDY22695 Canola mitochondrion, plastid 11.19 21.07
CDY31159 Canola plasma membrane 18.65 21.04
CDY09172 Canola extracellular, golgi 15.1 21.04
CDY51094 Canola extracellular, vacuole 17.41 21.03
CDY21633 Canola cytosol 14.92 20.59
CDY71029 Canola cytosol, plastid, vacuole 6.04 20.48
CDY24371 Canola extracellular, plasma membrane, vacuole 18.12 19.92
CDY07819 Canola vacuole 17.94 19.77
CDY29199 Canola vacuole 17.76 19.57
CDX73727 Canola vacuole 17.05 19.47
CDX75536 Canola endoplasmic reticulum, plasma membrane, vacuole 17.94 19.09
CDX78000 Canola vacuole 17.05 19.05
CDX69179 Canola plasma membrane 17.76 18.83
CDY38557 Canola cytosol, plastid 9.06 18.75
CDY02252 Canola golgi, plasma membrane, vacuole 10.3 18.59
CDY20815 Canola plasma membrane, plastid, vacuole 19.72 18.41
CDX73728 Canola vacuole 17.58 18.4
CDX77999 Canola vacuole 17.05 17.91
CDX69862 Canola plasma membrane, vacuole 16.34 17.8
CDY29013 Canola plasma membrane 16.87 17.79
CDX90651 Canola plasma membrane 16.87 17.79
CDY57356 Canola plasma membrane 19.72 17.56
CDY30609 Canola plasma membrane 19.36 17.44
CDY21629 Canola plastid, vacuole 15.81 17.18
CDX68564 Canola plasma membrane, vacuole 19.18 17.14
CDX83107 Canola plasma membrane 19.01 17.01
CDY22367 Canola plasma membrane 18.83 16.33
CDX71501 Canola plasma membrane 18.65 16.2
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10GO:A0A078ESW5InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASEnsemblPlants:CDY04326
ProteinID:CDY04326ProteinID:CDY04326.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00118167001InterPro:IPR021109
InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543ScanProsite:PS00141PFscan:PS51767
PANTHER:PTHR13683PANTHER:PTHR13683:SF334InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630InterPro:TAXi_CInterPro:TAXi_N
TMHMM:TMhelixUniParc:UPI0004EDCEE9SEG:seg:::
Description
BnaC05g25880D
Coordinates
chrLK031951:+:856057..858557
Molecular Weight (calculated)
62336.4 Da
IEP (calculated)
6.167
GRAVY (calculated)
-0.120
Length
563 amino acids
Sequence
(BLAST)
001: MEPQVDDQRA HAVVIITLPP SDDPSQGKTI SAFTLTDHHY PPETHPEDHP NPNFQPGPLH QNPDPGLWLS DLSTGSPRLV LSLIAISLLA IAFYASVFPN
101: TVQMFRVYDE RDRDDEANRR ETSSFVFPVY HKLGARAIPD RKLAEVVDVV KSGILLVNPV KVNDAFSAIA ASFDSSTTIL PVGGDVYPNG LYFTRILVGK
201: HYFYLDIDTG SDLTWVQCDA PCRSCAKGAN QLYTPRKGML VRSAESLCVE VQKNQMTQHC EDCEQCDYEI EYADLSSSLG VLTKDEFHIN LHNGSVADLD
301: IVFGCGYDQQ GLLLNTLVKT DGILGLSRAK ISLPSQLASR GIISNVIGHC LPSDLNGEGY IIMGSDLVPS HGITWVPMLH HSHLEVYQMQ VSKVSYGNGM
401: LSSDGRVGKV LFDTGSSYTY FPNKAYSHLV KSLKEVSGLG LTLDESDKTL PICWRADFVI SSLSDFKRFF RPITLQIGSK WWIISKKLVL QPEDHLIISK
501: KGNVCLGILD GSSVHDGSTI ILGDVSMRGH LIVYDNVKRR IGWMRSDCVR PRDSDFNVPF FQG
Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)
001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG
Arabidopsis Description
APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.