Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011646.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 99.62 | 99.43 |
| CDX69179 | Canola | plasma membrane | 99.05 | 98.68 |
| AT4G35880.1 | Thale cress | plasma membrane | 89.98 | 90.84 |
| VIT_00s0434g00080.t01 | Wine grape | plasma membrane, vacuole | 64.27 | 65.64 |
| KRH07987 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 62.38 | 63.58 |
| KRH69730 | Soybean | extracellular, plasma membrane, vacuole | 62.57 | 63.17 |
| PGSC0003DMT400009410 | Potato | plasma membrane, vacuole | 58.03 | 59.73 |
| Solyc02g083450.2.1 | Tomato | vacuole | 58.03 | 58.93 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 45.56 | 47.07 |
| CDY07819 | Canola | vacuole | 45.18 | 46.77 |
| CDY29199 | Canola | vacuole | 44.8 | 46.38 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 25.14 | 42.63 |
| CDX73727 | Canola | vacuole | 37.62 | 40.37 |
| CDY29013 | Canola | plasma membrane | 40.08 | 39.7 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 45.18 | 39.64 |
| CDX90651 | Canola | plasma membrane | 39.89 | 39.51 |
| CDX78000 | Canola | vacuole | 37.24 | 39.09 |
| CDX73728 | Canola | vacuole | 39.32 | 38.66 |
| CDX77999 | Canola | vacuole | 38.94 | 38.43 |
| CDY21633 | Canola | cytosol | 25.52 | 33.09 |
| CDX69862 | Canola | plasma membrane, vacuole | 32.14 | 32.88 |
| CDY21629 | Canola | plastid, vacuole | 31.57 | 32.24 |
| CDY22694 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.34 | 24.31 |
| CDY28705 | Canola | vacuole | 22.31 | 24.08 |
| CDY55968 | Canola | plasma membrane | 21.36 | 23.94 |
| CDY51538 | Canola | vacuole | 22.12 | 23.93 |
| CDY12353 | Canola | plasma membrane | 21.17 | 23.73 |
| CDY14973 | Canola | vacuole | 18.15 | 23.41 |
| CDY12535 | Canola | vacuole | 17.39 | 23.41 |
| CDY68869 | Canola | extracellular, vacuole | 19.28 | 23.39 |
| CDY32825 | Canola | endoplasmic reticulum, plasma membrane | 21.74 | 23.05 |
| CDY51094 | Canola | extracellular, vacuole | 20.23 | 22.96 |
| CDY31159 | Canola | plasma membrane | 21.55 | 22.85 |
| CDY06305 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.36 | 22.83 |
| CDY26962 | Canola | vacuole | 21.17 | 22.81 |
| CDX92331 | Canola | extracellular, plasma membrane, vacuole | 20.98 | 22.61 |
| CDX68982 | Canola | golgi, vacuole | 18.15 | 22.33 |
| CDY41753 | Canola | golgi, plasma membrane, vacuole | 20.23 | 22.2 |
| CDX75359 | Canola | golgi, vacuole | 17.96 | 22.14 |
| CDY53740 | Canola | vacuole | 16.82 | 21.98 |
| CDX88370 | Canola | plasma membrane, vacuole | 19.09 | 21.96 |
| CDY63001 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.04 | 21.95 |
| CDY37650 | Canola | extracellular, golgi | 20.04 | 21.95 |
| CDX87518 | Canola | plasma membrane, vacuole | 19.09 | 21.91 |
| CDX75024 | Canola | vacuole | 20.79 | 21.83 |
| CDY10133 | Canola | vacuole | 17.58 | 21.78 |
| CDY10006 | Canola | extracellular, plasma membrane, vacuole | 19.85 | 21.74 |
| CDY33177 | Canola | extracellular, plasma membrane, vacuole | 20.6 | 21.63 |
| CDY06183 | Canola | plasma membrane, vacuole | 19.85 | 21.6 |
| CDY22695 | Canola | mitochondrion, plastid | 12.1 | 21.4 |
| CDY41786 | Canola | plasma membrane, vacuole | 18.15 | 21.24 |
| CDY18730 | Canola | extracellular, plasma membrane, vacuole | 15.12 | 19.95 |
| CDY71029 | Canola | cytosol, plastid, vacuole | 6.24 | 19.88 |
| CDY09172 | Canola | extracellular, golgi | 15.12 | 19.8 |
| CDY60079 | Canola | cytosol | 18.71 | 18.37 |
| CDY04326 | Canola | cytosol, endoplasmic reticulum, vacuole | 19.09 | 17.94 |
| CDY38557 | Canola | cytosol, plastid | 8.88 | 17.28 |
| CDX83107 | Canola | plasma membrane | 18.34 | 15.42 |
| CDY30609 | Canola | plasma membrane | 18.15 | 15.36 |
| CDY57356 | Canola | plasma membrane | 18.15 | 15.19 |
| CDY22367 | Canola | plasma membrane | 18.53 | 15.1 |
| CDX68564 | Canola | plasma membrane, vacuole | 17.96 | 15.08 |
| CDX71501 | Canola | plasma membrane | 17.2 | 14.04 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | GO:A0A078CEJ7 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | EnsemblPlants:CDX75536 |
| ProteinID:CDX75536 | ProteinID:CDX75536.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00121434001 | InterPro:IPR021109 |
| InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PRINTS:PR00792 | ScanProsite:PS00141 |
| PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF384 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM |
| InterPro:TAXi_C | InterPro:TAXi_N | UniParc:UPI0004EF4CE3 | SEG:seg | : | : |
Description
BnaA01g01660D
Coordinates
chrLK031804:+:1529072..1531723
Molecular Weight (calculated)
58759.6 Da
IEP (calculated)
6.721
GRAVY (calculated)
-0.178
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAFFFKSTL FLIPILTLLL TSPSCSKARI FTFEMHHRFS DEVKRWSDLT GRFGSTFPPK GTFEYFNALV LRDRLIRGRR RLSDSESESS ALTFSDGNST
101: SRISSLGFLH YTTVKLGTPG MRFMVALDTG SDLFWVPCDC GKCAPTEGPA YSSEFELSIY NPKLSKTNKK VTCNNSLCAQ RNQCLGTFST CPYMVSYVSA
201: QTSTSGVLME DVMHLTTEDK SPERVEAYVT FGCGQVQSGS FLDIAAPNGL FGLGMEKISV PSVLAREGLV ADSFSMCFGH DGVGRISFGD KGSSDQEETP
301: FNLNPSHPNY NITVTRVRVG TTLIDDEFTA LFDTGTSFTY LVDPMYTSVS ESFHSQAQDK RHSPDPRIPF NYCYDMSSDA NASLIPSLSL TMKGNSHFTI
401: NDPIIVISTE GELVYCLAIV KSSELNIIGQ NYMTGYRVVF DREKLVLAWK KFDCYDIEET KTTLTGANKT EAVAPAMAAG IRTHNNNSSE LHRTNQTNSK
501: SSSSSSNQRF KTVTLWSFFR FLFILFPLL
101: SRISSLGFLH YTTVKLGTPG MRFMVALDTG SDLFWVPCDC GKCAPTEGPA YSSEFELSIY NPKLSKTNKK VTCNNSLCAQ RNQCLGTFST CPYMVSYVSA
201: QTSTSGVLME DVMHLTTEDK SPERVEAYVT FGCGQVQSGS FLDIAAPNGL FGLGMEKISV PSVLAREGLV ADSFSMCFGH DGVGRISFGD KGSSDQEETP
301: FNLNPSHPNY NITVTRVRVG TTLIDDEFTA LFDTGTSFTY LVDPMYTSVS ESFHSQAQDK RHSPDPRIPF NYCYDMSSDA NASLIPSLSL TMKGNSHFTI
401: NDPIIVISTE GELVYCLAIV KSSELNIIGQ NYMTGYRVVF DREKLVLAWK KFDCYDIEET KTTLTGANKT EAVAPAMAAG IRTHNNNSSE LHRTNQTNSK
501: SSSSSSNQRF KTVTLWSFFR FLFILFPLL
001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV
Arabidopsis Description
AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.