Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17760.1 | CDX89333 | AT4G26455.1 | 21798944 |
| AT2G17760.1 | CDX94330 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29199 | Canola | vacuole | 95.69 | 95.69 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 87.08 | 86.74 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 84.54 | 84.38 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 83.56 | 70.81 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 33.07 | 55.23 |
| KRH28845 | Soybean | vacuole | 52.05 | 52.36 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 31.9 | 52.24 |
| KRH76603 | Soybean | vacuole | 51.86 | 52.17 |
| KRH07991 | Soybean | nucleus | 51.27 | 50.78 |
| PGSC0003DMT400010765 | Potato | cytosol | 18.0 | 49.46 |
| PGSC0003DMT400009406 | Potato | plasma membrane, vacuole | 52.05 | 49.35 |
| Solyc02g083460.2.1 | Tomato | extracellular | 51.86 | 49.17 |
| GSMUA_Achr4P05070_001 | Banana | plasma membrane, vacuole | 42.47 | 48.44 |
| GSMUA_Achr1P07410_001 | Banana | cytosol | 13.11 | 47.86 |
| CDY29013 | Canola | plasma membrane | 48.92 | 46.82 |
| CDX90651 | Canola | plasma membrane | 48.73 | 46.63 |
| Solyc03g033360.1.1 | Tomato | plastid | 35.42 | 46.53 |
| PGSC0003DMT400058018 | Potato | vacuole | 49.12 | 45.89 |
| CDX69179 | Canola | plasma membrane | 47.16 | 45.39 |
| CDX73727 | Canola | vacuole | 43.64 | 45.23 |
| CDX75536 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.77 | 45.18 |
| TraesCS5B01G334700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.6 | 45.16 |
| GSMUA_Achr2P03530_001 | Banana | plasma membrane | 45.99 | 45.11 |
| TraesCS2D01G065800.1 | Wheat | vacuole | 45.01 | 45.1 |
| Zm00001d022600_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 44.81 | 44.9 |
| TraesCS5D01G340300.1 | Wheat | extracellular, plasma membrane, vacuole | 45.6 | 44.81 |
| TraesCS5A01G335500.1 | Wheat | extracellular, plasma membrane, vacuole | 45.4 | 44.62 |
| KRH69733 | Soybean | nucleus | 52.45 | 44.52 |
| TraesCS2A01G067500.1 | Wheat | vacuole | 44.42 | 44.25 |
| CDX78000 | Canola | vacuole | 43.64 | 44.25 |
| TraesCS2B01G079700.1 | Wheat | vacuole | 44.42 | 44.16 |
| KXG25917 | Sorghum | vacuole | 44.62 | 44.1 |
| EER99278 | Sorghum | extracellular, plasma membrane, vacuole | 44.62 | 43.59 |
| GSMUA_Achr1P07390_001 | Banana | extracellular, vacuole | 43.64 | 43.3 |
| GSMUA_Achr1P07400_001 | Banana | cytosol, plasma membrane, plastid | 13.5 | 43.12 |
| Zm00001d004132_P001 | Maize | extracellular | 43.64 | 43.05 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 37.77 | 42.98 |
| Os09t0542100-01 | Rice | plasma membrane | 41.1 | 42.86 |
| CDX77999 | Canola | vacuole | 44.62 | 42.54 |
| CDX73728 | Canola | vacuole | 44.23 | 42.01 |
| Os04t0228000-01 | Rice | extracellular, vacuole | 43.44 | 41.89 |
| HORVU5Hr1G084490.1 | Barley | vacuole | 44.81 | 41.34 |
| GSMUA_AchrUn_... | Banana | vacuole | 40.9 | 40.58 |
| GSMUA_Achr7P03880_001 | Banana | extracellular | 34.64 | 40.23 |
| TraesCS7D01G524300.1 | Wheat | plastid | 41.1 | 40.08 |
| TraesCS7A01G537200.1 | Wheat | plasma membrane | 41.49 | 39.63 |
| Os06t0717900-02 | Rice | extracellular | 41.88 | 38.84 |
| HORVU7Hr1G118020.3 | Barley | extracellular, plasma membrane, vacuole | 40.7 | 38.73 |
| EER88970 | Sorghum | vacuole | 40.51 | 38.26 |
| Zm00001d014804_P001 | Maize | extracellular | 40.31 | 37.94 |
| EER89124 | Sorghum | extracellular, vacuole | 42.47 | 37.74 |
| Zm00001d036037_P001 | Maize | vacuole | 41.88 | 37.15 |
| CDY21633 | Canola | cytosol | 26.81 | 33.58 |
| CDX69862 | Canola | plasma membrane, vacuole | 32.88 | 32.5 |
| CDY21629 | Canola | plastid, vacuole | 32.49 | 32.05 |
| CDY22694 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.98 | 24.31 |
| CDY68869 | Canola | extracellular, vacuole | 20.55 | 24.08 |
| CDX68982 | Canola | golgi, vacuole | 19.37 | 23.02 |
| CDX92331 | Canola | extracellular, plasma membrane, vacuole | 22.11 | 23.01 |
| CDY51094 | Canola | extracellular, vacuole | 20.94 | 22.96 |
| CDY71029 | Canola | cytosol, plastid, vacuole | 7.44 | 22.89 |
| CDY55968 | Canola | plasma membrane | 21.14 | 22.88 |
| CDX75359 | Canola | golgi, vacuole | 19.18 | 22.84 |
| CDY26962 | Canola | vacuole | 21.92 | 22.81 |
| CDY22695 | Canola | mitochondrion, plastid | 13.31 | 22.74 |
| CDY12353 | Canola | plasma membrane | 20.94 | 22.67 |
| CDY12535 | Canola | vacuole | 17.42 | 22.65 |
| CDY06305 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.92 | 22.63 |
| CDY10006 | Canola | extracellular, plasma membrane, vacuole | 21.33 | 22.57 |
| CDY28705 | Canola | vacuole | 21.53 | 22.45 |
| CDY14973 | Canola | vacuole | 18.0 | 22.44 |
| CDY06183 | Canola | plasma membrane, vacuole | 21.33 | 22.43 |
| CDX88370 | Canola | plasma membrane, vacuole | 20.16 | 22.39 |
| CDY41786 | Canola | plasma membrane, vacuole | 19.77 | 22.35 |
| CDY51538 | Canola | vacuole | 21.33 | 22.29 |
| CDX87518 | Canola | plasma membrane, vacuole | 19.96 | 22.13 |
| CDY41753 | Canola | golgi, plasma membrane, vacuole | 20.74 | 21.99 |
| CDY09172 | Canola | extracellular, golgi | 17.22 | 21.78 |
| CDY10133 | Canola | vacuole | 18.2 | 21.78 |
| CDY18730 | Canola | extracellular, plasma membrane, vacuole | 17.03 | 21.7 |
| CDX75024 | Canola | vacuole | 21.33 | 21.63 |
| CDY63001 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.35 | 21.53 |
| CDY37650 | Canola | extracellular, golgi | 20.35 | 21.53 |
| CDY31159 | Canola | plasma membrane | 20.94 | 21.44 |
| CDY32825 | Canola | endoplasmic reticulum, plasma membrane | 20.94 | 21.44 |
| CDY33177 | Canola | extracellular, plasma membrane, vacuole | 21.14 | 21.43 |
| CDY53740 | Canola | vacuole | 15.85 | 20.0 |
| CDY38557 | Canola | cytosol, plastid | 10.18 | 19.12 |
| CDY60079 | Canola | cytosol | 19.77 | 18.74 |
| CDY04326 | Canola | cytosol, endoplasmic reticulum, vacuole | 19.77 | 17.94 |
| CDX83107 | Canola | plasma membrane | 21.33 | 17.33 |
| CDX68564 | Canola | plasma membrane, vacuole | 21.33 | 17.3 |
| CDY30609 | Canola | plasma membrane | 20.94 | 17.12 |
| CDY57356 | Canola | plasma membrane | 21.14 | 17.09 |
| CDY22367 | Canola | plasma membrane | 20.35 | 16.02 |
| CDX71501 | Canola | plasma membrane | 19.18 | 15.12 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | GO:A0A078F436 | UniProt:A0A078F436 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS |
| EnsemblPlants:CDY07819 | ProteinID:CDY07819 | ProteinID:CDY07819.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00124965001 | InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 |
| PRINTS:PR00792 | ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF232 | InterPro:Peptidase_aspartic_dom_sf |
| SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | UniParc:UPI0004EF4C67 | SEG:seg |
Description
BnaC03g48030DBnaC03g48030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F436]
Coordinates
chrLK031981:-:216802..220027
Molecular Weight (calculated)
55787.8 Da
IEP (calculated)
6.713
GRAVY (calculated)
-0.141
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSYSSCRIT FAGLILLLVS SCGVDRCEGL GEFGFEFHHR FSDQVLGVFP GDGLPHLDSS KYYRVMAHRD RLIRGRRLAN QDQPLVTFAD GNETVRLNGL
101: GFLHYANVTV GTPSSWFLVA LDTGSDLFWL PCDCTSCVRK LKAPGGSSLE LNIYSSNASS TSSKVPCNST LCKRGDRCAS PNSNCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNEKNSKAIP ARITLGCGQV QTGVFHDGAA PNGLFGLGLD DISVPSVLAK EGIAANSFSM CFGKDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTQ ISVGGNTDDL KFDAVFDSGT SFTYLTDAAY TLISESFNSQ AMDKRYQTDS KLPFEYCYAS SPSKDSIEYP AVNLTMKGGS SYHVYHPLVV
401: FPMKDTDVYC LAIIKIEDIS IIGQNFMNGY RIVFDREKLT LGWKESDCYT GETSARTLPS NRSTFLARPP ASSFAPEATN IPSQRPSTSS SSYHSFSLSL
501: SFFYFSILAI F
101: GFLHYANVTV GTPSSWFLVA LDTGSDLFWL PCDCTSCVRK LKAPGGSSLE LNIYSSNASS TSSKVPCNST LCKRGDRCAS PNSNCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNEKNSKAIP ARITLGCGQV QTGVFHDGAA PNGLFGLGLD DISVPSVLAK EGIAANSFSM CFGKDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTQ ISVGGNTDDL KFDAVFDSGT SFTYLTDAAY TLISESFNSQ AMDKRYQTDS KLPFEYCYAS SPSKDSIEYP AVNLTMKGGS SYHVYHPLVV
401: FPMKDTDVYC LAIIKIEDIS IIGQNFMNGY RIVFDREKLT LGWKESDCYT GETSARTLPS NRSTFLARPP ASSFAPEATN IPSQRPSTSS SSYHSFSLSL
501: SFFYFSILAI F
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.