Factsheet for Os06t0717900-02

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 19226311
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0471300-01
Os08t0497900-01
Os09t0481300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17760.1	Os04t0471300-01	AT4G26455.1	21798944
AT2G17760.1	Os08t0497900-01	AT4G26455.1	21798944
AT2G17760.1	Os09t0481300-01	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G537200.1	Wheat	plasma membrane	60.8	62.62
HORVU7Hr1G118020.3	Barley	extracellular, plasma membrane, vacuole	60.62	62.2
TraesCS7D01G524300.1	Wheat	plastid	58.8	61.83
EER88970	Sorghum	vacuole	57.35	58.41
Zm00001d014804_P001	Maize	extracellular	57.35	58.2
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	39.02	47.88
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	26.32	47.39
GSMUA_AchrUn_...	Banana	vacuole	42.29	45.24
Os04t0228000-01	Rice	extracellular, vacuole	43.19	44.91
Os09t0542100-01	Rice	plasma membrane	39.56	44.49
GSMUA_Achr7P03880_001	Banana	extracellular	35.39	44.32
PGSC0003DMT400010765	Potato	cytosol	14.88	44.09
KRH76603	Soybean	vacuole	39.93	43.31
KRH28845	Soybean	vacuole	39.93	43.31
Bra002086.1-P	Field mustard	extracellular, plasma membrane, vacuole	39.2	42.94
Solyc03g033360.1.1	Tomato	plastid	29.95	42.42
KRH07991	Soybean	nucleus	39.56	42.25
CDY24371	Canola	extracellular, plasma membrane, vacuole	39.2	42.19
CDY07819	Canola	vacuole	38.84	41.88
AT2G17760.1	Thale cress	golgi, plasma membrane, vacuole	38.84	41.72
Bra024490.1-P	Field mustard	vacuole	38.48	41.49
CDY29199	Canola	vacuole	38.48	41.49
Solyc02g083460.2.1	Tomato	extracellular	40.47	41.37
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	40.29	41.19
PGSC0003DMT400058018	Potato	vacuole	39.93	40.22
CDX73727	Canola	vacuole	34.3	38.34
Bra036814.1-P	Field mustard	vacuole	33.58	38.3
CDY02252	Canola	golgi, plasma membrane, vacuole	21.6	38.14
AT3G51360.9	Thale cress	vacuole	34.3	37.95
Os02t0751100-01	Rice	plasma membrane	35.39	37.5
CDX78000	Canola	vacuole	34.12	37.3
Bra013063.1-P	Field mustard	plasma membrane	19.42	36.9
CDX73728	Canola	vacuole	35.75	36.62
CDX77999	Canola	vacuole	35.39	36.38
CDY20815	Canola	plasma membrane, plastid, vacuole	39.75	36.32
AT3G51330.1	Thale cress	extracellular, plasma membrane, vacuole	34.85	36.29
Bra036815.1-P	Field mustard	vacuole	35.57	36.16
KRH69733	Soybean	nucleus	39.38	36.05
CDY29013	Canola	plasma membrane	34.48	35.58
CDX90651	Canola	plasma membrane	34.48	35.58
AT3G51350.1	Thale cress	extracellular, plasma membrane, vacuole	33.94	35.42
Bra012857.1-P	Field mustard	plasma membrane	28.49	34.81
AT3G51340.1	Thale cress	plasma membrane	31.03	32.26
Os04t0337000-01	Rice	mitochondrion	15.79	27.1
Os11t0184600-00	Rice	extracellular	10.16	23.83
Os04t0334951-01	Rice	extracellular	18.51	23.56
Os12t0177500-01	Rice	plasma membrane, vacuole	17.79	23.28
Os11t0183900-01	Rice	plasma membrane	17.42	22.97
Os02t0473200-01	Rice	plasma membrane	20.51	22.87
Os11t0184800-01	Rice	vacuole	16.7	22.44
Os04t0334700-01	Rice	extracellular	19.24	21.99
Os04t0336600-00	Rice	extracellular	19.24	21.99
Os06t0268700-01	Rice	vacuole	18.87	19.33
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	18.33	17.63
Os07t0592200-02	Rice	plasma membrane	20.15	17.59

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	EntrezGene:4342085	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	ProteinID:BAD61723.1
ProteinID:BAS99523.1	ProteinID:EAZ38300.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0004190	GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121
EnsemblPlantsGene:Os06g0717900	EnsemblPlants:Os06t0717900-02	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792
ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF232	InterPro:Peptidase_aspartic_dom_sf	UniProt:Q5Z8N9
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI00000A41A7
RefSeq:XP_015641482.1	SEG:seg	:	:	:	:

Description

Peptidase A1 domain containing protein. (Os06t0717900-01);Similar to aspartic-type endopeptidase/ pepsin A. (Os06t0717900-02)

Coordinates

chr6:+:30509418..30512236

Molecular Weight (calculated)

57589.9 Da

IEP (calculated)

5.415

GRAVY (calculated)

0.040

Length

551 amino acids

Sequence
(BLAST)

001: MPHSSYLALA LAVAAVLAMA AVEVSGLGFD LHHRYSPIVQ RWAEERGHAG VSWPAGAEVI GSPEYYSALS RHDHALFARR GLAQGDGLVT FADGNITLRL
101: DGSLHYAEVA VGTPNTTFLV ALDTGSDLFW VPCDCKQCAP LGNLTAVDGG GGPELRQYSP SKSSTSKTVT CASNLCDQPN ACATATSSCP YAVRYAMANT
201: SSSGELVEDV LYLTREKGAA AAAAGAAVRT PVVFGCGQVQ TGSFLDGAAA DGLMGLGMEK VSVPSILAST GVVKSNSFSM CFSKDGLGRI NFGDTGSADQ
301: SETPFIVKST HSYYNISITS MSVGDKNLPL GFYAIADSGT SFTYLNDPAY TAYTTNFNAQ ISERRANFSG STRSGPFPFE YCYSLSPDQT TVELPVVSLT
401: TNGGAVFPVT SPVYPIAAQM TNGEIRIIGY CLAVIKSDLP IDIIGQNFMT GLKVVFNREK SVLGWQKFDC YKDEKMTDDG SSVGSPSPSP GPTTHVFPQP
501: QESDSPAGRT PIPGAAPVPR SSSAAAGGRA GFRLLSSMAL LLLAAAAAAV F

Best Arabidopsis Sequence Match ( AT4G35880.1 )
(BLAST)

001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV

Arabidopsis Description

AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.