Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G238200.1 | Wheat | cytosol | 50.87 | 43.76 |
| TraesCS7A01G240200.1 | Wheat | cytosol | 51.3 | 43.57 |
| TraesCS7B01G135800.1 | Wheat | cytosol, golgi, nucleus | 50.0 | 42.94 |
| Os09t0481300-01 | Rice | nucleus | 45.24 | 39.66 |
| HORVU7Hr1G048940.3 | Barley | cytosol | 48.7 | 39.4 |
| EES14314 | Sorghum | nucleus | 40.69 | 37.15 |
| Os04t0471300-01 | Rice | cytosol, golgi, nucleus | 17.53 | 26.82 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 28.57 | 22.18 |
| Bra039387.1-P | Field mustard | cytosol, golgi, nucleus, plastid | 19.05 | 22.0 |
| GSMUA_Achr10P... | Banana | cytosol | 23.81 | 21.83 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 28.79 | 21.66 |
| CDY43354 | Canola | cytosol, golgi, nucleus | 18.18 | 21.05 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 27.06 | 21.04 |
| Solyc07g066170.2.1 | Tomato | nucleus | 14.5 | 20.0 |
| CDX89333 | Canola | nucleus | 21.43 | 20.0 |
| Bra026434.1-P | Field mustard | nucleus | 21.43 | 20.0 |
| CDX94330 | Canola | nucleus | 21.21 | 19.96 |
| PGSC0003DMT400022426 | Potato | nucleus | 24.89 | 19.62 |
| CDX75706 | Canola | cytosol, golgi, nucleus | 17.75 | 19.52 |
| CDY24192 | Canola | plastid | 12.77 | 19.47 |
| AT4G26455.1 | Thale cress | nucleus | 20.13 | 19.02 |
| AT5G56210.1 | Thale cress | nucleus | 20.78 | 18.86 |
| CDY17403 | Canola | nucleus | 11.26 | 18.84 |
| Bra002835.1-P | Field mustard | cytosol, golgi, nucleus | 11.26 | 18.84 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 11.26 | 18.64 |
| KRH56393 | Soybean | cytosol | 23.59 | 18.57 |
| CDX82542 | Canola | plastid | 17.75 | 18.51 |
| Bra001502.1-P | Field mustard | nucleus, plastid | 17.53 | 18.33 |
| PGSC0003DMT400056956 | Potato | nucleus | 23.16 | 17.89 |
| KRH62532 | Soybean | endoplasmic reticulum | 22.51 | 17.78 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 16.88 | 15.06 |
Protein Annotations
| EnsemblPlants:Os08t0497900-01 | EnsemblPlantsGene:Os08g0497900 | EntrezGene:4345933 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR34562 | PANTHER:PTHR34562:SF4 | ProteinID:BAD08716.1 | ProteinID:BAF24055.1 | ProteinID:BAT06082.1 |
| RefSeq:XP_015649758.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000023ABB3 | UniProt:Q7F8T8 | MapMan:20.4.2.1.2 |
Description
Conserved hypothetical protein. (Os08t0497900-01)
Coordinates
chr8:-:24581335..24583695
Molecular Weight (calculated)
49514.8 Da
IEP (calculated)
5.946
GRAVY (calculated)
-0.479
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPAADMEN GAVGSPAAEV EAGASPGSSP VIKTKGRGLR RWRRIPREQR KEGSAASAAA GSGSAQLHKR RIPLPGGAPR GKLHEVVLEE EEEESSTASV
101: ESRFVPPAKL DPSLGVLLVA SSGFSVGAGG ADSDHSEDRS SGSRSSTAAS APRRHNDLSP FAADRAGRSS RAARARAAEA QYSLRCSNAV NSRRQSIAGN
201: GIHKVLADHC DHGEETPLMA RDYCNVENGS VVVRRLAQGS VDSDADAAQR SVGNNGDLGS GMKSSADPYA ESISLLQRTQ EALENEIKMF AVISKESNDN
301: FDGNDDDWSG LVDLAEPLEG TSQNVKDPES RPEEASYLGR LFLEKTEAEI KSIILTRAAQ TWAPLVDDQI ALYNAQKSLS GDYKQLELKL QHTKNRAAML
401: EEMAEKLRAE CRVLSGSSEV LRLQSRASRV SLFCFIQFVL LFTAVGTFLA RLLPSPTEYV PT
101: ESRFVPPAKL DPSLGVLLVA SSGFSVGAGG ADSDHSEDRS SGSRSSTAAS APRRHNDLSP FAADRAGRSS RAARARAAEA QYSLRCSNAV NSRRQSIAGN
201: GIHKVLADHC DHGEETPLMA RDYCNVENGS VVVRRLAQGS VDSDADAAQR SVGNNGDLGS GMKSSADPYA ESISLLQRTQ EALENEIKMF AVISKESNDN
301: FDGNDDDWSG LVDLAEPLEG TSQNVKDPES RPEEASYLGR LFLEKTEAEI KSIILTRAAQ TWAPLVDDQI ALYNAQKSLS GDYKQLELKL QHTKNRAAML
401: EEMAEKLRAE CRVLSGSSEV LRLQSRASRV SLFCFIQFVL LFTAVGTFLA RLLPSPTEYV PT
001: MDLESESSAL ESVDDNVLIQ QSASNVCDDG RSLDNGSCSD ESVKLLSTSN SVELGKPMSF DSPGDGGGAY SPVLKGQGLR KWRRIRRDLV KDTSANMENS
101: KALKRGLSGV AHSHGKQMQF QSPEVEQESQ GSVGSVNMLK SSGDGFDILG SSGYDSRFVA GVGFSAGMDL EIDDDRSSKS STVARAPKVI RYEKPMISSG
201: QGGNIRVENS KKHRGESVDF EKENSYSSLE SDSRKQSGRM MDYNGENGET SMRKDDAGGE GGESINTDNR YSDEMDPLTE AINGFLALQD ALEKEVQQFQ
301: EIGNEPMPQH HEQVSEANSP HPEIVTLVNN VEQLENMLEE TRSMLEVKES HIRDLESTTN QSKHSWGGTE IVVEDIFRQK IEAEIEYLIY SRSIDNLNSQ
401: MKLIDEQESL AEEQTHETLN KLGRVQTKAA NFTNRAQDLQ NDCIEITGTI KKRACKITSY VLIQLVLLST VVLLLLSQLL PEPDTVVPT
101: KALKRGLSGV AHSHGKQMQF QSPEVEQESQ GSVGSVNMLK SSGDGFDILG SSGYDSRFVA GVGFSAGMDL EIDDDRSSKS STVARAPKVI RYEKPMISSG
201: QGGNIRVENS KKHRGESVDF EKENSYSSLE SDSRKQSGRM MDYNGENGET SMRKDDAGGE GGESINTDNR YSDEMDPLTE AINGFLALQD ALEKEVQQFQ
301: EIGNEPMPQH HEQVSEANSP HPEIVTLVNN VEQLENMLEE TRSMLEVKES HIRDLESTTN QSKHSWGGTE IVVEDIFRQK IEAEIEYLIY SRSIDNLNSQ
401: MKLIDEQESL AEEQTHETLN KLGRVQTKAA NFTNRAQDLQ NDCIEITGTI KKRACKITSY VLIQLVLLST VVLLLLSQLL PEPDTVVPT
Arabidopsis Description
WIP1WPP domain-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.