Factsheet for Os01t0951800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
mitochondrion 1
extracellular 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0383000-01	Rice	cytosol	79.14	78.66
GSMUA_Achr5P08180_001	Banana	unclear	73.62	73.17
KRH66798	Soybean	cytosol, nucleus, peroxisome	72.39	70.66
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	69.33	67.66
PGSC0003DMT400011821	Potato	cytosol, nucleus, peroxisome	69.33	67.66
VIT_08s0007g05550.t01	Wine grape	cytosol	68.71	67.07
VIT_06s0009g03660.t01	Wine grape	cytosol, nucleus, peroxisome	68.1	66.47
Solyc11g065100.1.1	Tomato	plastid	67.48	64.71
CDY35339	Canola	cytosol	66.26	64.67
KRG95120	Soybean	cytosol, nucleus, peroxisome	71.78	64.64
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	66.26	63.53
CDX77006	Canola	cytosol	65.03	63.47
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	66.26	62.43
AT3G57090.2	Thale cress	cytosol	65.03	62.35
VIT_08s0007g05560.t01	Wine grape	cytosol	63.19	61.31
Bra034268.1-P	Field mustard	cytosol	39.26	60.95
Bra007301.1-P	Field mustard	cytosol	63.19	60.59
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	62.58	60.0
PGSC0003DMT400020987	Potato	cytosol, nucleus, peroxisome	61.35	59.88
Solyc10g079550.1.1	Tomato	plastid	61.35	58.14
KRH14565	Soybean	cytosol	60.12	57.65
Bra008891.1-P	Field mustard	cytosol	57.06	54.39
CDX97191	Canola	extracellular	56.44	53.8
CDX69682	Canola	cytosol, nucleus, peroxisome	56.44	53.49
Bra023375.1-P	Field mustard	cytosol	55.21	53.25
CDX91164	Canola	cytosol	55.21	52.94
CDX85689	Canola	cytosol, golgi, peroxisome	55.21	52.94
AT5G12390.1	Thale cress	cytosol	53.99	52.69
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	63.19	41.87

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	EntrezGene:4325741	EMBL:AK069239	ProteinID:BAD87890.1	ProteinID:BAF07328.2
ProteinID:BAS76247.1	ProteinID:EEE56012.1	InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol
GO:GO:0000266	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016559	InterPro:IPR011990	EnsemblPlantsGene:Os01g0951800
EnsemblPlants:Os01t0951800-01	PFAM:PF14852	PFAM:PF14853	PIRSF:PIRSF008835	PANTHER:PTHR13247	PANTHER:PTHR13247:SF9
UniProt:Q5JKW7	SUPFAM:SSF48452	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00004C2AF1	RefSeq:XP_015646041.1
SEG:seg	:	:	:	:	:

Description

Tetratricopeptide repeat 11 Fission 1 protein domain containing protein. (Os01t0951800-01)

Coordinates

chr1:-:41904236..41907449

Molecular Weight (calculated)

17445.1 Da

IEP (calculated)

8.725

GRAVY (calculated)

-0.031

Length

163 amino acids

Sequence
(BLAST)

001: MEAKIGRLVG AIGAFFSGGD NVPWCGRDII AGVEREVAEA ATEEHKNVSI MRLSWALVHS RNTDDVNRGI AMLQASLGGS KSPLEAREKL YLLAVGHYRN
101: GDYPRSRQLL EHCLEIQPGW GQALSLKKTV EDKIAKDGVI GIGIATTAVG LLVGIAAAVA RKN

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.