Factsheet for Bra008891.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69682	Canola	cytosol, nucleus, peroxisome	98.25	97.67
CDX97191	Canola	extracellular	97.66	97.66
Bra023375.1-P	Field mustard	cytosol	87.13	88.17
AT5G12390.1	Thale cress	cytosol	79.53	81.44
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	63.16	64.67
PGSC0003DMT400011821	Potato	cytosol, nucleus, peroxisome	63.16	64.67
VIT_06s0009g03660.t01	Wine grape	cytosol, nucleus, peroxisome	61.99	63.47
Bra034268.1-P	Field mustard	cytosol	38.6	62.86
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	59.06	61.59
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	59.06	61.59
TraesCS1A01G239800.1	Wheat	plastid	59.06	61.59
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	60.82	61.18
GSMUA_Achr5P08180_001	Banana	unclear	58.48	60.98
Solyc11g065100.1.1	Tomato	plastid	60.23	60.59
Os05t0383000-01	Rice	cytosol	57.31	59.76
Bra007301.1-P	Field mustard	cytosol	57.31	57.65
Zm00001d009978_P001	Maize	plastid	54.97	57.32
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	56.73	57.06
KRH14565	Soybean	cytosol	56.73	57.06
Os01t0951800-01	Rice	plasma membrane	54.39	57.06
EES19450	Sorghum	cytosol, nucleus, peroxisome	52.63	55.21
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	53.22	53.85
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	53.22	53.85
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	53.22	53.85
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	54.39	53.76
OQU92576	Sorghum	cytosol, golgi, peroxisome	52.05	52.35
Zm00001d047461_P001	Maize	extracellular, mitochondrion	52.05	52.35
HORVU4Hr1G074140.2	Barley	plastid	53.22	42.33

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	EnsemblPlantsGene:Bra008891	EnsemblPlants:Bra008891.1	EnsemblPlants:Bra008891.1-P	InterPro:Fis1
InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol	GO:GO:0000266	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005741	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016559	InterPro:IPR011990	InterPro:IPR019734	UniProt:M4CXE4	PFAM:PF14852	PFAM:PF14853
PIRSF:PIRSF008835	PFscan:PS50005	PANTHER:PTHR13247	PANTHER:PTHR13247:SF9	SUPFAM:SSF48452	TMHMM:TMhelix
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002543D34	SEG:seg	:	:

Description

AT5G12390 (E=4e-061) FIS1B | FIS1B (FISSION 1B); binding

Coordinates

chrA10:+:14319138..14320073

Molecular Weight (calculated)

18554.2 Da

IEP (calculated)

4.746

GRAVY (calculated)

0.008

Length

171 amino acids

Sequence
(BLAST)

001: MEATIGKVFD SVSTFFSGVA SGSSDEFPLC DTDIISGCEK ELAEAQKGQD EGFKKESIMR LSWALVHSKM PADIQRGIAM LEGSVVSDTS PVTLREKLYL
101: LAIGYYRSGD FSRSRDYIER CLEVEPEWRQ AQTLKTAIED RIVKDGVIGV GIAVTAVGIV AGIAAALVRR G

Best Arabidopsis Sequence Match ( AT5G12390.1 )
(BLAST)

001: MDAAIGKVFD SVSDFFSGAA SASADEFPLC DSDIISGCEK ELAEAQDEGR KKECIMRLSW ALVHSKMPSD IQRGIAMLEA LVVNDTSAMK LREKLYLLAL
101: GYYRSGDFSR SRDCIERCLE VEPESGQAQA LKKAIEDRIV KDGVIGVGIA VTAVGVVAGI AAAILRS

Arabidopsis Description

FIS1BMitochondrial fission 1 protein [Source:UniProtKB/TrEMBL;Acc:A0A178U9A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.