CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
mitochondrion 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047461_P001	Maize	extracellular, mitochondrion	92.35	92.35
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	87.65	86.13
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	80.0	80.47
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	80.0	80.47
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	79.41	79.88
GSMUA_Achr5P08180_001	Banana	unclear	63.53	65.85
HORVU4Hr1G074140.2	Barley	plastid	76.47	60.47
AT3G57090.2	Thale cress	cytosol	60.0	60.0
CDY35339	Canola	cytosol	58.82	59.88
Solyc11g065100.1.1	Tomato	plastid	58.82	58.82
PGSC0003DMT400011821	Potato	cytosol, nucleus, peroxisome	57.65	58.68
KRH66798	Soybean	cytosol, nucleus, peroxisome	57.65	58.68
CDX77006	Canola	cytosol	57.65	58.68
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	57.65	58.68
EES19450	Sorghum	cytosol, nucleus, peroxisome	55.88	58.28
Bra034268.1-P	Field mustard	cytosol	35.88	58.1
VIT_08s0007g05550.t01	Wine grape	cytosol	57.06	58.08
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	57.65	57.65
VIT_06s0009g03660.t01	Wine grape	cytosol, nucleus, peroxisome	56.47	57.48
Bra007301.1-P	Field mustard	cytosol	57.06	57.06
KRH14565	Soybean	cytosol	54.12	54.12
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	54.12	54.12
KRG95120	Soybean	cytosol, nucleus, peroxisome	57.06	53.59
VIT_08s0007g05560.t01	Wine grape	cytosol	52.94	53.57
PGSC0003DMT400020987	Potato	cytosol, nucleus, peroxisome	51.76	52.69
CDX97191	Canola	extracellular	52.94	52.63
CDX69682	Canola	cytosol, nucleus, peroxisome	52.94	52.33
Bra008891.1-P	Field mustard	cytosol	52.35	52.05
Solyc10g079550.1.1	Tomato	plastid	52.35	51.74
CDX91164	Canola	cytosol	50.59	50.59
Bra023375.1-P	Field mustard	cytosol	50.0	50.3
CDX85689	Canola	cytosol, golgi, peroxisome	50.0	50.0
AT5G12390.1	Thale cress	cytosol	47.65	48.5
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	57.06	39.43

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	EntrezGene:8080813	UniProt:A0A1Z5S9S9	InterPro:Fis1	InterPro:Fis1_TPR_C
InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol	GO:GO:0000266	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016559
InterPro:IPR011990	EnsemblPlants:OQU92576	ProteinID:OQU92576	ProteinID:OQU92576.1	PFAM:PF14852	PFAM:PF14853
PIRSF:PIRSF008835	PANTHER:PTHR13247	PANTHER:PTHR13247:SF2	EnsemblPlantsGene:SORBI_3001G367800	SUPFAM:SSF48452	TMHMM:TMhelix
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0001A820E8	RefSeq:XP_002465255.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:65676668..65680333

Molecular Weight (calculated)

18989.8 Da

IEP (calculated)

7.420

GRAVY (calculated)

-0.342

Length

170 amino acids

Sequence
(BLAST)

001: MDGPVGKLID SVGSIFRGSD ILPWCDRDII AGFESEVLEA KNEEQKNESL MRLSWALVHS RQPEDVNRGI GMLEASLDRP SSPEQAREKL YLLAVGRYRT
101: GDYTRSRQLL ERCLEIQHDW RQAMTLQRLV EEKTRRDGMI GMAIITGAFG VVGLVAGGII AAASSSSRRR

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.