Factsheet for Solyc10g079550.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020987	Potato	cytosol, nucleus, peroxisome	91.86	94.61
KRH66798	Soybean	cytosol, nucleus, peroxisome	66.86	68.86
VIT_08s0007g05550.t01	Wine grape	cytosol	65.7	67.66
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	65.12	67.07
Solyc11g065100.1.1	Tomato	plastid	63.95	64.71
GSMUA_Achr5P08180_001	Banana	unclear	61.63	64.63
TraesCS1A01G239800.1	Wheat	plastid	61.05	64.02
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	61.05	64.02
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	61.05	64.02
KRG95120	Soybean	cytosol, nucleus, peroxisome	66.86	63.54
CDY35339	Canola	cytosol	61.63	63.47
Os05t0383000-01	Rice	cytosol	60.47	63.41
VIT_08s0007g05560.t01	Wine grape	cytosol	61.63	63.1
EES19450	Sorghum	cytosol, nucleus, peroxisome	59.3	62.58
CDX77006	Canola	cytosol	60.47	62.28
Os01t0951800-01	Rice	plasma membrane	58.14	61.35
AT3G57090.2	Thale cress	cytosol	60.47	61.18
Zm00001d009978_P001	Maize	plastid	58.14	60.98
Bra007301.1-P	Field mustard	cytosol	59.88	60.59
Bra034268.1-P	Field mustard	cytosol	36.05	59.05
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	54.65	54.34
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	52.33	53.25
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	52.33	53.25
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	51.74	52.66
OQU92576	Sorghum	cytosol, golgi, peroxisome	51.74	52.35
Zm00001d047461_P001	Maize	extracellular, mitochondrion	51.16	51.76
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	59.88	41.87
HORVU4Hr1G074140.2	Barley	plastid	51.16	40.93

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol
GO:GO:0000266	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0005777	GO:GO:0007005
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016559	InterPro:IPR011990	UniProt:K4D2J6	PFAM:PF14852	PFAM:PF14853
PIRSF:PIRSF008835	PANTHER:PTHR13247	PANTHER:PTHR13247:SF9	SUPFAM:SSF48452	EnsemblPlantsGene:Solyc10g079550.1	EnsemblPlants:Solyc10g079550.1.1
TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000276A8A0	SEG:seg	:	:

Description

Mitochondrial fission 1 protein A [Source:Projected from Arabidopsis thaliana (AT3G57090) UniProtKB/Swiss-Prot;Acc:Q9M1J1]

Coordinates

chr10:-:61065705..61068036

Molecular Weight (calculated)

18860.6 Da

IEP (calculated)

5.978

GRAVY (calculated)

-0.240

Length

172 amino acids

Sequence
(BLAST)

001: MEAKINRLFG PIVTFINGGD QLPWTSPDIV VGCEREVADA NKGASDEGQN ESNMRLSWAL VHSKQPEDVQ RGIAMLEGEN YSPSLANASS PLQQREKLYL
101: LAVGYYRSGE YSRSRELTVQ CLEIAPDWRQ ALSLKKAIED RITKDGVIGI GITVTTIGLI AGGIIASLVR RK

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.