CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95120	Soybean	cytosol, nucleus, peroxisome	98.8	91.16
VIT_08s0007g05550.t01	Wine grape	cytosol	80.24	80.24
Bra034268.1-P	Field mustard	cytosol	48.5	77.14
CDY35339	Canola	cytosol	74.25	74.25
VIT_08s0007g05560.t01	Wine grape	cytosol	74.25	73.81
CDX77006	Canola	cytosol	73.05	73.05
GSMUA_Achr5P08180_001	Banana	unclear	71.26	72.56
Os01t0951800-01	Rice	plasma membrane	70.66	72.39
Os05t0383000-01	Rice	cytosol	70.06	71.34
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	69.46	70.73
TraesCS1A01G239800.1	Wheat	plastid	69.46	70.73
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	69.46	70.73
PGSC0003DMT400020987	Potato	cytosol, nucleus, peroxisome	68.26	68.26
Zm00001d009978_P001	Maize	plastid	66.47	67.68
EES19450	Sorghum	cytosol, nucleus, peroxisome	65.87	67.48
Solyc10g079550.1.1	Tomato	plastid	68.86	66.86
AT3G57090.2	Thale cress	cytosol	67.66	66.47
Bra007301.1-P	Field mustard	cytosol	67.66	66.47
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	62.28	61.18
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	62.28	60.12
KRH14565	Soybean	cytosol	61.08	60.0
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	58.68	57.99
OQU92576	Sorghum	cytosol, golgi, peroxisome	58.68	57.65
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	58.08	57.4
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	58.08	57.4
Zm00001d047461_P001	Maize	extracellular, mitochondrion	58.08	57.06
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	67.07	45.53
HORVU4Hr1G074140.2	Barley	plastid	56.89	44.19

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100785425	MapMan:13.6.2.2	EMBL:ACUP02002011	EMBL:BT092099	UniProt:C6T3T8
InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol	EnsemblPlantsGene:GLYMA_03G129400	GO:GO:0000266
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016559	InterPro:IPR011990	EnsemblPlants:KRH66798	ProteinID:KRH66798
ProteinID:KRH66798.1	PFAM:PF14852	PFAM:PF14853	PIRSF:PIRSF008835	PANTHER:PTHR13247	PANTHER:PTHR13247:SF9
SUPFAM:SSF48452	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0001B1561B	:	:

Description

hypothetical protein

Coordinates

chr3:+:34398639..34402108

Molecular Weight (calculated)

18527.1 Da

IEP (calculated)

5.841

GRAVY (calculated)

-0.302

Length

167 amino acids

Sequence
(BLAST)

001: MDAKFGSLFE SIGNFFTGGE QIPWCDRDVI AGCEREVAEA ANGDSEERKN ESIMRLSWAL VHSRQKEDIQ RGIAMLETSL GNDKSPLHQR EKLYLLAVGY
101: YRSNDYGRSR QLVEQCLEIA PDWRQALSLK KIVEDRIAKD GVIGIGITAT AVGLIVGGIA TALARRN

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.