Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- peroxisome 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009978_P001 | Maize | plastid | 86.5 | 85.98 |
| TraesCS1D01G240000.1 | Wheat | cytosol, golgi, peroxisome | 80.37 | 79.88 |
| TraesCS1B01G252000.1 | Wheat | cytosol, golgi, peroxisome | 80.37 | 79.88 |
| TraesCS1A01G239800.1 | Wheat | plastid | 80.37 | 79.88 |
| Os05t0383000-01 | Rice | cytosol | 74.23 | 73.78 |
| GSMUA_Achr5P08180_001 | Banana | unclear | 73.62 | 73.17 |
| VIT_08s0007g05550.t01 | Wine grape | cytosol | 69.33 | 67.66 |
| KRH66798 | Soybean | cytosol, nucleus, peroxisome | 67.48 | 65.87 |
| Bra007301.1-P | Field mustard | cytosol | 68.1 | 65.29 |
| CDY35339 | Canola | cytosol | 66.26 | 64.67 |
| Solyc11g065100.1.1 | Tomato | plastid | 66.87 | 64.12 |
| Solyc12g099770.1.1 | Tomato | cytosol, nucleus, peroxisome | 65.64 | 64.07 |
| PGSC0003DMT400011821 | Potato | cytosol, nucleus, peroxisome | 65.64 | 64.07 |
| PGSC0003DMT400080258 | Potato | cytosol, nucleus, peroxisome | 66.26 | 63.53 |
| CDX77006 | Canola | cytosol | 65.03 | 63.47 |
| VIT_06s0009g03660.t01 | Wine grape | cytosol, nucleus, peroxisome | 65.03 | 63.47 |
| AT3G57090.2 | Thale cress | cytosol | 65.64 | 62.94 |
| Bra034268.1-P | Field mustard | cytosol | 39.88 | 61.9 |
| VIT_08s0007g05560.t01 | Wine grape | cytosol | 62.58 | 60.71 |
| PGSC0003DMT400020987 | Potato | cytosol, nucleus, peroxisome | 61.96 | 60.48 |
| KRG95120 | Soybean | cytosol, nucleus, peroxisome | 66.87 | 60.22 |
| Solyc10g079550.1.1 | Tomato | plastid | 62.58 | 59.3 |
| KRH73559 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 60.74 | 58.24 |
| KRH14565 | Soybean | cytosol | 60.74 | 58.24 |
| OQU92576 | Sorghum | cytosol, golgi, peroxisome | 58.28 | 55.88 |
| Bra008891.1-P | Field mustard | cytosol | 55.21 | 52.63 |
| CDX97191 | Canola | extracellular | 54.6 | 52.05 |
| CDX69682 | Canola | cytosol, nucleus, peroxisome | 54.6 | 51.74 |
| Bra023375.1-P | Field mustard | cytosol | 53.37 | 51.48 |
| CDX85689 | Canola | cytosol, golgi, peroxisome | 53.37 | 51.18 |
| CDX91164 | Canola | cytosol | 53.37 | 51.18 |
| AT5G12390.1 | Thale cress | cytosol | 51.53 | 50.3 |
| CDX72070 | Canola | endoplasmic reticulum, golgi, plasma membrane | 68.1 | 45.12 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.6.2.2 | EntrezGene:8076829 | UniProt:C5YXD8 | EnsemblPlants:EES19450 | ProteinID:EES19450 |
| ProteinID:EES19450.1 | InterPro:Fis1 | InterPro:Fis1_TPR_C | InterPro:Fis1_TPR_N | InterPro:Fis1_cytosol | GO:GO:0000266 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005741 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016559 | InterPro:IPR011990 | PFAM:PF14852 | PFAM:PF14853 |
| PIRSF:PIRSF008835 | PANTHER:PTHR13247 | PANTHER:PTHR13247:SF9 | EnsemblPlantsGene:SORBI_3009G122100 | SUPFAM:SSF48452 | unigene:Sbi.6093 |
| TMHMM:TMhelix | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0001A88A3A | RefSeq:XP_002441020.1 | : | : |
Description
hypothetical protein
Coordinates
chr9:-:47260961..47268300
Molecular Weight (calculated)
17917.6 Da
IEP (calculated)
5.981
GRAVY (calculated)
-0.201
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKMERFFE SVGNFFTGGD NIPWCDRDLI AGIERELADA ANDEQRNASL MRLSWALVHS KQTDDVNRGI SMLQASLDNS GSPLETKEKM YLLAVGLFRI
101: GDYSKSRQLA DRCLEIQPDW RQAMSLKKAI EDKIAKDGVI GIGIAATAVG LLVGGIAALA RKK
101: GDYSKSRQLA DRCLEIQPDW RQAMSLKKAI EDKIAKDGVI GIGIAATAVG LLVGGIAALA RKK
001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK
Arabidopsis Description
FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.