CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023375.1-P	Field mustard	cytosol	98.24	98.82
CDX91164	Canola	cytosol	95.88	95.88
CDX97191	Canola	extracellular	87.65	87.13
CDX69682	Canola	cytosol, nucleus, peroxisome	87.65	86.63
AT5G12390.1	Thale cress	cytosol	81.76	83.23
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	64.12	65.27
PGSC0003DMT400011821	Potato	cytosol, nucleus, peroxisome	64.12	65.27
VIT_06s0009g03660.t01	Wine grape	cytosol, nucleus, peroxisome	62.35	63.47
CDY35339	Canola	cytosol	60.59	61.68
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	61.18	61.18
Solyc11g065100.1.1	Tomato	plastid	60.0	60.0
CDX77006	Canola	cytosol	58.82	59.88
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	57.06	59.15
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	57.06	59.15
TraesCS1A01G239800.1	Wheat	plastid	57.06	59.15
GSMUA_Achr5P08180_001	Banana	unclear	56.47	58.54
Os05t0383000-01	Rice	cytosol	55.88	57.93
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	55.88	55.88
Zm00001d009978_P001	Maize	plastid	53.53	55.49
KRH14565	Soybean	cytosol	55.29	55.29
Os01t0951800-01	Rice	plasma membrane	52.94	55.21
EES19450	Sorghum	cytosol, nucleus, peroxisome	51.18	53.37
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	52.35	52.66
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	52.35	52.66
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	52.35	52.66
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	52.94	52.02
Zm00001d047461_P001	Maize	extracellular, mitochondrion	50.59	50.59
OQU92576	Sorghum	cytosol, golgi, peroxisome	50.0	50.0
HORVU4Hr1G074140.2	Barley	plastid	51.76	40.93
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	58.82	40.65

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	GO:A0A078DBJ3	EnsemblPlants:CDX85689	ProteinID:CDX85689	ProteinID:CDX85689.1
InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol	GO:GO:0000266	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:GSBRNA2T00143428001
InterPro:IPR011990	PFAM:PF14852	PFAM:PF14853	PIRSF:PIRSF008835	PANTHER:PTHR13247	PANTHER:PTHR13247:SF9
SUPFAM:SSF48452	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EDBA97	SEG:seg	:

Description

BnaA02g01240D

Coordinates

chrLK031842:+:1226794..1227861

Molecular Weight (calculated)

18288.9 Da

IEP (calculated)

4.720

GRAVY (calculated)

0.068

Length

170 amino acids

Sequence
(BLAST)

001: MDATIGKVFD SVSGFFSGAA SGSTDEFPLC DTDIISGCEK ELAEAQKGQD EGLKKECIMR LSWALVHSKI HADIQRGISM LEASVVSDTS PMNLREKLYL
101: LALGYYRSSD FSRSRECVER CLEVEPQWGQ AQTLKTAIED RIVKADGVIG VGIAVTAVGV VAGIAAALLR

Best Arabidopsis Sequence Match ( AT5G12390.1 )
(BLAST)

001: MDAAIGKVFD SVSDFFSGAA SASADEFPLC DSDIISGCEK ELAEAQDEGR KKECIMRLSW ALVHSKMPSD IQRGIAMLEA LVVNDTSAMK LREKLYLLAL
101: GYYRSGDFSR SRDCIERCLE VEPESGQAQA LKKAIEDRIV KDGVIGVGIA VTAVGVVAGI AAAILRS

Arabidopsis Description

FIS1BMitochondrial fission 1 protein [Source:UniProtKB/TrEMBL;Acc:A0A178U9A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.