Factsheet for Solyc11g065100.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	94.71	94.71
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	81.76	83.23
VIT_06s0009g03660.t01	Wine grape	cytosol, nucleus, peroxisome	77.65	79.04
GSMUA_Achr5P08180_001	Banana	unclear	72.94	75.61
Os05t0383000-01	Rice	cytosol	69.41	71.95
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	66.47	68.9
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	66.47	68.9
TraesCS1A01G239800.1	Wheat	plastid	66.47	68.9
Os01t0951800-01	Rice	plasma membrane	64.71	67.48
EES19450	Sorghum	cytosol, nucleus, peroxisome	64.12	66.87
KRH14565	Soybean	cytosol	66.47	66.47
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	66.47	66.47
Zm00001d009978_P001	Maize	plastid	63.53	65.85
Solyc10g079550.1.1	Tomato	plastid	64.71	63.95
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	62.35	62.72
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	62.35	62.72
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	63.53	62.43
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	61.76	62.13
Bra023375.1-P	Field mustard	cytosol	60.59	60.95
CDX97191	Canola	extracellular	61.18	60.82
CDX91164	Canola	cytosol	60.59	60.59
CDX69682	Canola	cytosol, nucleus, peroxisome	61.18	60.47
Bra008891.1-P	Field mustard	cytosol	60.59	60.23
CDX85689	Canola	cytosol, golgi, peroxisome	60.0	60.0
Zm00001d047461_P001	Maize	extracellular, mitochondrion	59.41	59.41
OQU92576	Sorghum	cytosol, golgi, peroxisome	58.82	58.82
AT5G12390.1	Thale cress	cytosol	57.65	58.68
HORVU4Hr1G074140.2	Barley	plastid	60.0	47.44

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol
GO:GO:0000266	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016559	InterPro:IPR011990	UniProt:K4D9C3
PFAM:PF14852	PFAM:PF14853	PIRSF:PIRSF008835	PANTHER:PTHR13247	PANTHER:PTHR13247:SF9	SUPFAM:SSF48452
EnsemblPlantsGene:Solyc11g065100.1	EnsemblPlants:Solyc11g065100.1.1	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000276980E	SEG:seg

Description

Mitochondrial fission 1 protein [Source:UniProtKB/TrEMBL;Acc:K4D9C3]

Coordinates

chr11:-:50416278..50418710

Molecular Weight (calculated)

18665.5 Da

IEP (calculated)

7.136

GRAVY (calculated)

-0.132

Length

170 amino acids

Sequence
(BLAST)

001: MDAKIGNFFE SVGNFFIGVD QIPWCDSDIV TGCEREVAEA GKGSSDELKN ECIMRLSWAL VHSRRPEDVQ RGIAMLETSL GGSNSPLQMR EKIYLLAVGY
101: YRSGDYARSR QLVDRCLEIE PEWRQALTLR KTVEDKIKKD GVIGIGIAAT AVTAVGLLAG GLVAALSRKK

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.