Factsheet for TraesCS1D01G240000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, golgi, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G239800.1	Wheat	plastid	100.0	100.0
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	100.0	100.0
Os05t0383000-01	Rice	cytosol	83.54	83.54
EES19450	Sorghum	cytosol, nucleus, peroxisome	79.88	80.37
Zm00001d009978_P001	Maize	plastid	79.27	79.27
GSMUA_Achr5P08180_001	Banana	unclear	76.83	76.83
VIT_08s0007g05550.t01	Wine grape	cytosol	71.95	70.66
CDY35339	Canola	cytosol	70.73	69.46
KRH66798	Soybean	cytosol, nucleus, peroxisome	70.73	69.46
Bra034268.1-P	Field mustard	cytosol	43.9	68.57
CDX77006	Canola	cytosol	69.51	68.26
Solyc12g099770.1.1	Tomato	cytosol, nucleus, peroxisome	69.51	68.26
PGSC0003DMT400011821	Potato	cytosol, nucleus, peroxisome	69.51	68.26
AT3G57090.2	Thale cress	cytosol	69.51	67.06
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	68.9	66.86
Bra007301.1-P	Field mustard	cytosol	68.9	66.47
Solyc11g065100.1.1	Tomato	plastid	68.9	66.47
VIT_06s0009g03660.t01	Wine grape	cytosol, nucleus, peroxisome	67.68	66.47
PGSC0003DMT400080258	Potato	cytosol, nucleus, peroxisome	67.68	65.29
VIT_08s0007g05560.t01	Wine grape	cytosol	66.46	64.88
PGSC0003DMT400020987	Potato	cytosol, nucleus, peroxisome	65.24	64.07
KRG95120	Soybean	cytosol, nucleus, peroxisome	70.12	63.54
KRH73559	Soybean	cytosol, endoplasmic reticulum, peroxisome	65.85	63.53
KRH14565	Soybean	cytosol	65.24	62.94
Solyc10g079550.1.1	Tomato	plastid	64.02	61.05
Bra008891.1-P	Field mustard	cytosol	61.59	59.06
CDX97191	Canola	extracellular	60.98	58.48
CDX69682	Canola	cytosol, nucleus, peroxisome	60.98	58.14
Bra023375.1-P	Field mustard	cytosol	59.15	57.4
CDX91164	Canola	cytosol	59.15	57.06
CDX85689	Canola	cytosol, golgi, peroxisome	59.15	57.06
AT5G12390.1	Thale cress	cytosol	56.71	55.69
CDX72070	Canola	endoplasmic reticulum, golgi, plasma membrane	68.9	45.94

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	InterPro:Fis1	InterPro:Fis1_TPR_C	InterPro:Fis1_TPR_N	InterPro:Fis1_cytosol
GO:GO:0000266	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	InterPro:IPR011990	PFAM:PF14852	PFAM:PF14853	PIRSF:PIRSF008835	PANTHER:PTHR13247
PANTHER:PTHR13247:SF9	SUPFAM:SSF48452	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS1D01G240000	EnsemblPlants:TraesCS1D01G240000.1
TIGR:cd12212	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:329732164..329735106

Molecular Weight (calculated)

18002.5 Da

IEP (calculated)

7.347

GRAVY (calculated)

-0.270

Length

164 amino acids

Sequence
(BLAST)

001: MEAQMSKFFE SVGSFFSGGD NIPWCDRDII AGCEREVAEA ATEEQKNDSI MRLSWALVHS KQTDDVNRGI GMIEASLDKT TSPLQTREKL YLLAVGHYRN
101: GNYVRSRQLA DRCLEIQPDW RQASSLKKAI EDKIAKDGVI GIGIATTAVG LIVGGIAAAL ARKK

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.