Factsheet for Bra034268.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35339	Canola	cytosol	99.05	62.28
CDX77006	Canola	cytosol	98.1	61.68
VIT_08s0007g05550.t01	Wine grape	cytosol	81.9	51.5
KRH66798	Soybean	cytosol, nucleus, peroxisome	77.14	48.5
VIT_08s0007g05560.t01	Wine grape	cytosol	76.19	47.62
Bra007301.1-P	Field mustard	cytosol	74.29	45.88
KRG95120	Soybean	cytosol, nucleus, peroxisome	76.19	44.2
GSMUA_Achr5P08180_001	Banana	unclear	68.57	43.9
TraesCS1D01G240000.1	Wheat	cytosol, golgi, peroxisome	68.57	43.9
TraesCS1B01G252000.1	Wheat	cytosol, golgi, peroxisome	68.57	43.9
TraesCS1A01G239800.1	Wheat	plastid	68.57	43.9
Os05t0383000-01	Rice	cytosol	64.76	41.46
Zm00001d009978_P001	Maize	plastid	63.81	40.85
EES19450	Sorghum	cytosol, nucleus, peroxisome	61.9	39.88
Os01t0951800-01	Rice	plasma membrane	60.95	39.26
PGSC0003DMT400020987	Potato	cytosol, nucleus, peroxisome	61.9	38.92
Bra008891.1-P	Field mustard	cytosol	62.86	38.6
Bra023375.1-P	Field mustard	cytosol	61.9	38.46
Os03t0356484-01	Rice	cytosol, golgi, peroxisome	61.9	37.57
TraesCS4A01G023200.1	Wheat	cytosol, golgi, peroxisome	59.05	36.69
TraesCS4B01G280300.1	Wheat	cytosol, golgi, peroxisome	59.05	36.69
TraesCS4D01G278800.1	Wheat	cytosol, golgi, peroxisome	59.05	36.69
Solyc10g079550.1.1	Tomato	plastid	59.05	36.05
OQU92576	Sorghum	cytosol, golgi, peroxisome	58.1	35.88
Zm00001d047461_P001	Maize	extracellular, mitochondrion	58.1	35.88
HORVU4Hr1G074140.2	Barley	plastid	59.05	28.84

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.6.2.2	EnsemblPlantsGene:Bra034268	EnsemblPlants:Bra034268.1	EnsemblPlants:Bra034268.1-P	InterPro:Fis1
InterPro:Fis1_TPR_N	GO:GO:0000266	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	InterPro:IPR011990
UniProt:M4EZM5	PFAM:PF14852	PANTHER:PTHR13247	PANTHER:PTHR13247:SF9	SUPFAM:SSF48452	TMHMM:TMhelix
InterPro:TPR-like_helical_dom_sf	UniParc:UPI00025450D6	SEG:seg	:	:	:

Description

AT3G57090 (E=3e-022) BIGYIN, FIS1A | BIGYIN; binding

Coordinates

chrA04:-:11530148..11531090

Molecular Weight (calculated)

11291.5 Da

IEP (calculated)

4.670

GRAVY (calculated)

-0.104

Length

105 amino acids

Sequence
(BLAST)

001: MDSKMGNFFD SIGSFFSGGD KIPWCDRDVI LECEKEVKTA TDGDSEDQKK ESIMRLSWAL VHSRQAEDIQ RGIAMLEDGV IGIGITATAV GLIAGGIAAA
101: LARKK

Best Arabidopsis Sequence Match ( AT3G57090.1 )
(BLAST)

001: MDAKIGQFFD SVGTFFSGSD KIPWCDGDVI AGCEREVREA TDSGTEDLKK ECLMRLSWAL VHSRQTEDVQ RGIAMLEASL ESSAPPLEDR EKLYLLAVGY
101: YRSGNYSRSR QLVDRCIEMQ ADWRQALVLK KTIEDKITKD GVIGIGITAT AFGAVGLIAG GIVAAMSRKK

Arabidopsis Description

FIS1AMitochondrial fission 1 protein A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.